RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 PTCH1Q13635 1447 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 KRT87PA6NCN2 255 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 OR14I1A6ND48 311 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CAPN9O14815 690 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TSPAN4O14817 238 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TSPAN3O60637 253 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SOCS5O75159 536 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CELF2O95319 508 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 AMHP03971 560 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 ATXN1LP0C7T5 689 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 TMEM225BP0DP42 221 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CYP2D6P10635 497 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 ATF7P17544 494 aaPredicted RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 GAP43P17677 238 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 ITGAXP20702 1163 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 MSH2P43246 934 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 NDUFV1P49821 464 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SLC37A1P57057 533 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CLDN2P57739 230 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 LOXL3P58215 753 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 PTH1RQ03431 593 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TBL3Q12788 808 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 TFCP2Q12800 502 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 RRP1BQ14684 758 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 NR1I3Q14994 352 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 GEN1Q17RS7 908 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SHROOM1Q2M3G4 852 aaPredicted RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 CERCAMQ5T4B2 595 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CDC73Q6P1J9 531 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 ANKRD16Q6P6B7 361 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 MAMDC4Q6UXC1 1216 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 B3GNT8Q7Z7M8 397 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 DSG4Q86SJ6 1040 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SLC9B2Q86UD5 537 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 LINC00482Q8N8I6 264 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 USP38Q8NB14 1042 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 RASSF8Q8NHQ8 419 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 GFM2Q969S9 779 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 RRNAD1Q96FB5 475 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 EIF3CQ99613 913 aaKnown RBP2.79□□□□□ -1.96
XRN1-210ENST00000472697 SMOQ99835 787 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 PTDSS2Q9BVG9 487 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 KIF9Q9HAQ2 790 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 GCM1Q9NP62 436 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SLC35C2Q9NQQ7 365 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 TCP11L1Q9NUJ3 509 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 FBXO28Q9NVF7 368 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 NINJ2Q9NZG7 142 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 CNIH4Q9P003 139 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 BLOC1S6Q9UL45 172 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 SHOC2Q9UQ13 582 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 A2MP01023 1474 aa2.79□□□□□ -1.96
XRN1-210ENST00000472697 A0A1W2PRV1 198 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 ARHGEF37A1IGU5 675 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 DNM1LO00429 736 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PRICKLE3O43900 615 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 SMPD2O60906 423 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 SLC22A3O75751 556 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 LARGE1O95461 756 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 CBX6O95503 412 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 IL6RP08887 468 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 ALDOCP09972 364 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 THEGLP0DJG4 465 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 MYBL1P10243 752 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 TCF4P15884 667 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PPP3CBP16298 524 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 GLDCP23378 1020 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RPA1P27694 616 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 TKTP29401 623 aaKnown RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 STAT6P42226 847 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PIP4K2AP48426 406 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 CDH13P55290 713 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 HDAC4P56524 1084 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 IKQ13123 557 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 KRTCAP3Q53RY4 240 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 NHSL2Q5HYW2 709 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 B3GNTL1Q67FW5 361 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 DENND1BQ6P3S1 775 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 FBXO42Q6P3S6 717 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 LAYNQ6UX15 382 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RAPH1Q70E73 1250 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 KIF18AQ8NI77 898 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 XAGE5Q8WWM1 108 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RAB40AQ8WXH6 277 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 CPA5Q8WXQ8 436 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 LPIN2Q92539 896 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 GTF3C6Q969F1 213 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 TMCO6Q96DC7 493 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 MBD6Q96DN6 1003 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 GDAP1L1Q96MZ0 367 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 GPR78Q96P69 363 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 NEK1Q96PY6 1258 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 ACTRT3Q9BYD9 372 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 L2HGDHQ9H9P8 463 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 SLC6A13Q9NSD5 602 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 PLAGL1Q9UM63 463 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 RGPD3A6NKT7 1758 aaPredicted RBP2.78□□□□□ -1.96
XRN1-210ENST00000472697 RGPD4Q7Z3J3 1758 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 NEXMIFQ5QGS0 1516 aa2.78□□□□□ -1.96
XRN1-210ENST00000472697 SCAF11Q99590 1463 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms