RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 EIF5BO60841 1220 aaKnown RBP6□□□□□ -1.45
CCDC39-202ENST00000471307 CHRNB2P17787 502 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 KLRC2P26717 231 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 GSTM2P28161 218 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 PNLIPRP1P54315 467 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 SELENOVP59797 346 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 LTBQ06643 244 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 ZNF585BQ52M93 769 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 DNTTIP2Q5QJE6 756 aaKnown RBP6□□□□□ -1.45
CCDC39-202ENST00000471307 SYCP2LQ5T4T6 812 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 DCAF12L2Q5VW00 463 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 KIAA1324Q6UXG2 1013 aaKnown RBP6□□□□□ -1.45
CCDC39-202ENST00000471307 CTU1Q7Z7A3 348 aaKnown RBP6□□□□□ -1.45
CCDC39-202ENST00000471307 MYLK4Q86YV6 388 aaPredicted RBP6□□□□□ -1.45
CCDC39-202ENST00000471307 CADM3Q8N126 398 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 TMEM217Q8N7C4 229 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 PTGR2Q8N8N7 351 aaPredicted RBP6□□□□□ -1.45
CCDC39-202ENST00000471307 SMRP1Q8NCR6 262 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 ENGASEQ8NFI3 743 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 SCAMP5Q8TAC9 235 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 DDX23Q9BUQ8 820 aaKnown RBP6□□□□□ -1.45
CCDC39-202ENST00000471307 TRIM31Q9BZY9 425 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 ABHD16BQ9H3Z7 469 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 HIPK3Q9H422 1215 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 CD93Q9NPY3 652 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 DACT1Q9NYF0 836 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 FZD10Q9ULW2 581 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 INSL5Q9Y5Q6 135 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 UGGT1Q9NYU2 1555 aa6□□□□□ -1.45
CCDC39-202ENST00000471307 RIMS1Q86UR5 1692 aaKnown RBP6□□□□□ -1.45
CCDC39-202ENST00000471307 KDM5AP29375 1690 aaKnown RBP5.99□□□□□ -1.45
CCDC39-202ENST00000471307 TCRBV7S3A2A0A539 114 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 ACKR2O00590 384 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 MCM2P49736 904 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 Q0VFX4 171 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 ASIC2Q16515 512 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 DUSP6Q16828 381 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 GXYLT1Q4G148 440 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 LIN54Q6MZP7 749 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 MTFR2Q6P444 385 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 C18orf65Q6ZTR6 163 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 NOL8Q76FK4 1167 aaKnown RBP5.99□□□□□ -1.45
CCDC39-202ENST00000471307 TRILQ7L0X0 811 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 ATG16L2Q8NAA4 619 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 CMASQ8NFW8 434 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-202ENST00000471307 STT3BQ8TCJ2 826 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 ARRDC3Q96B67 414 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 FAM84BQ96KN1 310 aaPredicted RBP5.99□□□□□ -1.45
CCDC39-202ENST00000471307 CRB3Q9BUF7 120 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 HDHD5Q9BXW7 423 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 SLCO5A1Q9H2Y9 848 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 TMEM131LA2VDJ0 1609 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 ADGRB3O60242 1522 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 ZFYVE9O95405 1425 aa5.99□□□□□ -1.45
CCDC39-202ENST00000471307 A2ML1A8K2U0 1454 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 PTPRMP28827 1452 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 NPIPB13A6NJU9 1138 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 NPIPB5A8MRT5 1133 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 BECN2A8MW95 431 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 NPIPB4C9JG80 1138 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 PRSS44E7EML9 344 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 ACOT8O14734 319 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 RGS14O43566 566 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 LCATP04180 440 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 UNGP13051 313 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-202ENST00000471307 PRKCHP24723 683 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 DSC1Q08554 894 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 GPS2Q13227 327 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 BLMHQ13867 455 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 AADACL2Q6P093 401 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 GALNT7Q86SF2 657 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 OTUD7AQ8TE49 926 aaPredicted RBP5.98□□□□□ -1.45
CCDC39-202ENST00000471307 HDAC7Q8WUI4 952 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 NEUROG1Q92886 237 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 C3orf49Q96BT1 292 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 MED30Q96HR3 178 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 KRTAP2-2Q9BYT5 123 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 KLHL31Q9H511 634 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 PLCB1Q9NQ66 1216 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 PRAG1Q86YV5 1406 aa5.98□□□□□ -1.45
CCDC39-202ENST00000471307 MYOM2P54296 1465 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 CLEC18AA5D8T8 446 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 INAFM1C9JVW0 142 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 MS4A18H0YCH9 400 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 TMCC1O94876 653 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 CSTBP04080 98 aaKnown RBP5.97□□□□□ -1.45
CCDC39-202ENST00000471307 TNFRSF8P28908 595 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 TYK2P29597 1187 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 HOXA11P31270 313 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-202ENST00000471307 CRYZQ08257 329 aaKnown RBP5.97□□□□□ -1.45
CCDC39-202ENST00000471307 KEAP1Q14145 624 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 ZNF324BQ6AW86 544 aaPredicted RBP5.97□□□□□ -1.45
CCDC39-202ENST00000471307 SCN4BQ8IWT1 228 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 ZDHHC23Q8IYP9 409 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 LRRC57Q8N9N7 239 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 CLEC18CQ8NCF0 446 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 TMEM163Q8TC26 289 aa5.97□□□□□ -1.45
CCDC39-202ENST00000471307 CADM1Q9BY67 442 aaKnown RBP5.97□□□□□ -1.45
CCDC39-202ENST00000471307 SEZ6LQ9BYH1 1024 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms