RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SLC7A9P82251 487 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 SLC18A2Q05940 514 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 DBN1Q16643 649 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 UGP2Q16851 508 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ANKRD20A4Q4UJ75 823 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ARHGAP15Q53QZ3 475 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 FAM182AQ5T1J6 154 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 GRTP1Q5TC63 336 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 IL31Q6EBC2 164 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ALG1LQ6GMV1 187 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 RFWD3Q6PCD5 774 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TRMT10BQ6PF06 316 aaKnown RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 LILRA6Q6PI73 481 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 KDELC1Q6UW63 502 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 PACS1Q6VY07 963 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TIFABQ6ZNK6 161 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 RGS9BPQ6ZS82 235 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 NLRP9Q7RTR0 991 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TMEM150AQ86TG1 271 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 KCNMB4Q86W47 210 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TMC8Q8IU68 726 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TRIM42Q8IWZ5 723 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 FAM217AQ8IXS0 508 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CACNA2D3Q8IZS8 1091 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CPXM2Q8N436 756 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ANKS4BQ8N8V4 417 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 SPATA22Q8NHS9 363 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 GDAP1Q8TB36 358 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 LRRC8CQ8TDW0 803 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ATP2A3Q93084 1043 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 GRAMD1AQ96CP6 724 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 FEM1CQ96JP0 617 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CABS1Q96KC9 395 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 MRGPRX2Q96LB1 330 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF317Q96PQ6 595 aaPredicted RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 LBHD1Q9BQE6 289 aaPredicted RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 PLCD4Q9BRC7 762 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 FAM167BQ9BTA0 163 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 KIF9Q9HAQ2 790 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 PDFQ9HBH1 243 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ARNT2Q9HBZ2 717 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ATP13A1Q9HD20 1204 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 SMYD2Q9NRG4 433 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 PIH1D1Q9NWS0 290 aaKnown RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 UBP1Q9NZI7 540 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 PRKAG3Q9UGI9 489 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 ZMYM5Q9UJ78 669 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 AGO1Q9UL18 857 aaKnown RBP9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TBC1D30Q9Y2I9 924 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 SH3BP1Q9Y3L3 701 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 TCAF1Q9Y4C2 921 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 CPQQ9Y646 472 aa9.48□□□□□ -0.89
SMC1A-205ENST00000469129 SCN8AQ9UQD0 1980 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 C5orf67F2Z3F1 127 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 KDELR3O43731 214 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 GLRA3O75311 464 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 PMPCBO75439 489 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 ASMTLO95671 621 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 MT-CYBP00156 380 aaPredicted RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 FGF1P05230 155 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 SERPINF2P08697 491 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 HDCP19113 662 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 DRD4P21917 467 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 ADRA1DP25100 572 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 HOXD9P28356 352 aaPredicted RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 HOXA9P31269 272 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 BMP8BP34820 402 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 RPA3P35244 121 aaPredicted RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 ACVRL1P37023 503 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 CD86P42081 329 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 SERPINB8P50452 374 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 SERPINH1P50454 418 aaKnown RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 NEK3P51956 506 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 WNT3AP56704 352 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 SLC10A7Q0GE19 358 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 LRRC14Q15048 493 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 PDK4Q16654 411 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 CERCAMQ5T4B2 595 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 PLPP4Q5VZY2 271 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 KIAA0930Q6ICG6 404 aaPredicted RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 PDE12Q6L8Q7 609 aaKnown RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 PKN3Q6P5Z2 889 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 LVRNQ6Q4G3 990 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 Q6ZNB5 142 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 LRRC34Q8IZ02 419 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 CFAP52Q8N1V2 620 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 ZNF557Q8N988 423 aaPredicted RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 CCDC197Q8NCU1 140 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 CALML6Q8TD86 181 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 DENND1AQ8TEH3 1009 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 IFT43Q96FT9 208 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 ZFRQ96KR1 1074 aaKnown RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 RBBP8Q99708 897 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 PAIP2Q9BPZ3 127 aaKnown RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 APOL2Q9BQE5 337 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 MGME1Q9BQP7 344 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 RNF38Q9H0F5 515 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 MUC3BQ9H195 1237 aa9.47□□□□□ -0.89
SMC1A-205ENST00000469129 C20orf96Q9NUD7 363 aaPredicted RBP9.47□□□□□ -0.89
SMC1A-205ENST00000469129 SMPD4Q9NXE4 827 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms