RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 KCTD10Q9H3F6 313 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 POPDC2Q9HBU9 364 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 MRPL47Q9HD33 250 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 ANLNQ9NQW6 1124 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 TMLHEQ9NVH6 421 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 SFMBT1Q9UHJ3 866 aa6.11□□□□□ -1.43
SHQ1-205ENST00000468371 FAF1Q9UNN5 650 aaPredicted RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 HBS1LQ9Y450 684 aaKnown RBP6.11□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3DA0A087WVF3 549 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3IA0A087WXS9 549 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3EA0A087X179 549 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3KA0A087X1G2 549 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3FA6NER0 549 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 GOLGA8CPA6NN73 597 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3LB9A6J9 549 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 CCDC22O60826 627 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ENDOD1O94919 500 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TTC4O95801 387 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3HP0C7X1 549 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 NTSR1P30989 418 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 PDE1BQ01064 536 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 CAV1Q03135 178 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 MAP7D1Q3KQU3 841 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 PPP6R3Q5H9R7 873 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 RNF43Q68DV7 783 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3GQ6DHY5 549 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3CQ6IPX1 549 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TBC1D3Q8IZP1 549 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 SLC25A41Q8N5S1 370 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 PRELID2Q8N945 189 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 PDCD6IPQ8WUM4 868 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ZNF606Q8WXB4 792 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 FOXJ1Q92949 421 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 IER2Q9BTL4 223 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 C2orf49Q9BVC5 232 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TSSK1BQ9BXA7 367 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 OSBPL8Q9BZF1 889 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 FAM124BQ9H5Z6 455 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 SLC2A4RGQ9NR83 387 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 CLIC5Q9NZA1 410 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 GPR179Q6PRD1 2367 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TCRBV7S2A1N4TA0A589 114 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 COCHO43405 550 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ZNF217O75362 1048 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 RNASEH2AO75792 299 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TJP3O95049 919 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ZWINTO95229 277 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 PRAMEF12O95522 483 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 KRT3P12035 628 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 CNR2P34972 360 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 VHLP40337 213 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ARL4CP56559 192 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 BTKQ06187 659 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 DUPD1Q68J44 220 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 SLC36A4Q6YBV0 504 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 FITM2Q8N6M3 262 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TEX9Q8N6V9 391 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 KCTD6Q8NC69 237 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 PLD4Q96BZ4 506 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TRMT2BQ96GJ1 504 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 MAGEB18Q96M61 343 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 KIAA1522Q9P206 1035 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 SCML2Q9UQR0 700 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 EME2A4GXA9 379 aaPredicted RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 CBX4O00257 560 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 MGRN1O60291 552 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 STAU1O95793 577 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TRUB2O95900 331 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ATF6P18850 670 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 PSMA2P25787 234 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 MMP13P45452 471 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 GEMIN4P57678 1058 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 MRPS21P82921 87 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 SULT2A1Q06520 285 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 HIF1AQ16665 826 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ZC3H12AQ5D1E8 599 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 SNX30Q5VWJ9 437 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ARMC3Q5W041 872 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 C3orf62Q6ZUJ4 267 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 BMP8AQ7Z5Y6 402 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 RHOT1Q8IXI2 618 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 C1orf131Q8NDD1 294 aaKnown RBP6.1□□□□□ -1.43
SHQ1-205ENST00000468371 SPOCK2Q92563 424 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 PPP1R36Q96LQ0 422 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 RMDN2Q96LZ7 410 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 TUBB6Q9BUF5 446 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 OSBPL6Q9BZF3 934 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ASNSD1Q9NWL6 643 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 RHBDL2Q9NX52 303 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 ARMCX1Q9P291 453 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 CYP8B1Q9UNU6 501 aa6.1□□□□□ -1.43
SHQ1-205ENST00000468371 LOC100653049A0A140TA62 436 aa6.09□□□□□ -1.43
SHQ1-205ENST00000468371 IQANK1A0A1B0GTG1 560 aa6.09□□□□□ -1.43
SHQ1-205ENST00000468371 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.09□□□□□ -1.43
SHQ1-205ENST00000468371 DNAJC6O75061 913 aa6.09□□□□□ -1.43
SHQ1-205ENST00000468371 KRT34O76011 436 aa6.09□□□□□ -1.43
SHQ1-205ENST00000468371 LAMB3Q13751 1172 aa6.09□□□□□ -1.43
SHQ1-205ENST00000468371 RAP1GAP2Q684P5 730 aa6.09□□□□□ -1.43
SHQ1-205ENST00000468371 PRPF39Q86UA1 669 aaKnown RBP6.09□□□□□ -1.43
SHQ1-205ENST00000468371 CRLF3Q8IUI8 442 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms