RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ATRXP46100 2492 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 UNGP13051 313 aaPredicted RBP24.96■■□□□ 1.59
PTCH1-210ENST00000468211 CCNHP51946 323 aaPredicted RBP24.96■■□□□ 1.59
PTCH1-210ENST00000468211 NRG1Q02297 640 aaPredicted RBP24.96■■□□□ 1.59
PTCH1-210ENST00000468211 SLC20A2Q08357 652 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 FGL2Q14314 439 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 PROX2Q3B8N5 592 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 CARD16Q5EG05 197 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 FBXL19Q6PCT2 694 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 GCNT7Q6ZNI0 430 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 RBM43Q6ZSC3 357 aaKnown RBP24.96■■□□□ 1.59
PTCH1-210ENST00000468211 NLRP14Q86W24 1093 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 PCDH20Q8N6Y1 951 aaKnown RBP24.96■■□□□ 1.59
PTCH1-210ENST00000468211 CCDC185Q8N715 623 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 VOPP1Q96AW1 172 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 HEPHQ9BQS7 1158 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 UCKL1Q9NWZ5 548 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 DNAI1Q9UI46 699 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 IGSF10Q6WRI0 2623 aa24.96■■□□□ 1.59
PTCH1-210ENST00000468211 SIGLEC6O43699 453 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 JUPP14923 745 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 HNRNPA2B1P22626 353 aaKnown RBP24.95■■□□□ 1.58
PTCH1-210ENST00000468211 SDC4P31431 198 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 GKP32189 559 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 HDAC4P56524 1084 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 CCDC15Q0P6D6 951 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 SYCP1Q15431 976 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 HES3Q5TGS1 186 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 RWDD4Q6NW29 188 aaKnown RBP24.95■■□□□ 1.58
PTCH1-210ENST00000468211 SLC22A18ASQ8N1D0 253 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 CENPIQ92674 756 aaPredicted RBP24.95■■□□□ 1.58
PTCH1-210ENST00000468211 ARHGEF2Q92974 986 aaKnown RBP24.95■■□□□ 1.58
PTCH1-210ENST00000468211 TM6SF2Q9BZW4 377 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 OSBPL2Q9H1P3 480 aa24.95■■□□□ 1.58
PTCH1-210ENST00000468211 ADRB3P13945 408 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 CKMT2P17540 419 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 ITGB7P26010 798 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 AKT2P31751 481 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 RFC1P35251 1148 aaPredicted RBP24.94■■□□□ 1.58
PTCH1-210ENST00000468211 PTPN9P43378 593 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 NEK3P51956 506 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 COPB1P53618 953 aaKnown RBP24.94■■□□□ 1.58
PTCH1-210ENST00000468211 TARDBPQ13148 414 aaKnown RBP eCLIP24.94■■□□□ 1.58
PTCH1-210ENST00000468211 FKBP15Q5T1M5 1219 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 LEKR1Q6ZMV7 388 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 PARS2Q7L3T8 475 aaKnown RBP24.94■■□□□ 1.58
PTCH1-210ENST00000468211 OR6K2Q8NGY2 324 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 PPP1R16AQ96I34 528 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 CALN1Q9BXU9 219 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 ZDHHC6Q9H6R6 413 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 KLHL11Q9NVR0 708 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 FADS3Q9Y5Q0 445 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 LOC400499M0QZD8 3231 aa24.94■■□□□ 1.58
PTCH1-210ENST00000468211 RAD51BO15315 384 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 LRIG2O94898 1065 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 GIMD1P0DJR0 217 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 RHOQP17081 205 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 DGKAP23743 735 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 L1CAMP32004 1257 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 STAT1P42224 750 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 ARL13BQ3SXY8 428 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 TRIM72Q6ZMU5 477 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 STRADAQ7RTN6 431 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 ABI3BPQ7Z7G0 1075 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 PDZD3Q86UT5 571 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 FAM172AQ8WUF8 416 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 BMFQ96LC9 184 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 TMEM248Q9NWD8 314 aa24.93■■□□□ 1.58
PTCH1-210ENST00000468211 PLEKP08567 350 aaPredicted RBP24.92■■□□□ 1.58
PTCH1-210ENST00000468211 CDK4P11802 303 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 KRT3P12035 628 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 HNF1BP35680 557 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 MAPK8IP2Q13387 824 aaPredicted RBP24.92■■□□□ 1.58
PTCH1-210ENST00000468211 CLEC16AQ2KHT3 1053 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 ZNF542PQ5EBM4 170 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 WDR59Q6PJI9 974 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 SLC17A9Q9BYT1 436 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 ADAM22Q9P0K1 906 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 GGT7Q9UJ14 662 aa24.92■■□□□ 1.58
PTCH1-210ENST00000468211 POM121BA6NF01 834 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 FFAR2O15552 330 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 PIAS2O75928 621 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 PAK4O96013 591 aaPredicted RBP24.91■■□□□ 1.58
PTCH1-210ENST00000468211 ACP1P24666 158 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 ABL2P42684 1182 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 MAPKAPK2P49137 400 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 ZNF211Q13398 564 aaPredicted RBP24.91■■□□□ 1.58
PTCH1-210ENST00000468211 KDM7AQ6ZMT4 941 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 Q6ZSR6 202 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 PYROXD2Q8N2H3 581 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 ISG20Q96AZ6 181 aaKnown RBP24.91■■□□□ 1.58
PTCH1-210ENST00000468211 TBC1D31Q96DN5 1066 aa24.91■■□□□ 1.58
PTCH1-210ENST00000468211 LIMA1Q9UHB6 759 aaKnown RBP24.91■■□□□ 1.58
PTCH1-210ENST00000468211 SPINT1O43278 529 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 TPM2P07951 284 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 NSFP46459 744 aaKnown RBP24.9■■□□□ 1.58
PTCH1-210ENST00000468211 GSCP56915 257 aaPredicted RBP24.9■■□□□ 1.58
PTCH1-210ENST00000468211 RPS21P63220 83 aaKnown RBP24.9■■□□□ 1.58
PTCH1-210ENST00000468211 ILKQ13418 452 aa24.9■■□□□ 1.58
PTCH1-210ENST00000468211 KIAA1161Q6NSJ0 714 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms