RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 OTOP3Q7RTS5 596 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 PIGWQ7Z7B1 504 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 PRPF39Q86UA1 669 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 RASSF3Q86WH2 238 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 DENND1CQ8IV53 801 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 CNTN4Q8IWV2 1026 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 KLHL23Q8NBE8 558 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 CCDC197Q8NCU1 140 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 IPMKQ8NFU5 416 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 LRRC8CQ8TDW0 803 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 LRRN4Q8WUT4 740 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 SPOCK2Q92563 424 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 BADQ92934 168 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 ZNF669Q96BR6 464 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 PABPC5Q96DU9 382 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 SRPK1Q96SB4 655 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 C19orf43Q9BQ61 176 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 LBHD1Q9BQE6 289 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 MGME1Q9BQP7 344 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 ACE2Q9BYF1 805 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 IL21Q9HBE4 155 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 PDFQ9HBH1 243 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 NT5MQ9NPB1 228 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 TLR9Q9NR96 1032 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 UBA2Q9UBT2 640 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 AGO1Q9UL18 857 aaKnown RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 GRID1Q9ULK0 1009 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 TCAF1Q9Y4C2 921 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 ZFP37Q9Y6Q3 630 aaPredicted RBP10.34□□□□□ -0.75
MSH5-213ENST00000468136 NUP205Q92621 2012 aa10.34□□□□□ -0.75
MSH5-213ENST00000468136 HTTP42858 3142 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 ZCWPW2A0A1B0GU75 182 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 LOC285095A0A1B0GVY8 99 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 E2F8A0AVK6 867 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 ERICH4A6NGS2 130 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 H3BNC9 293 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 GFRA2O00451 464 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 BIRC5O15392 142 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 ATP9BO43861 1147 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 XYLBO75191 536 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 GLRA3O75311 464 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 KIAA0754O94854 1291 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 APOA4P06727 396 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 DHRS4L1P0CG22 281 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 TCF3P15923 654 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 GABRR2P28476 465 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 CTNNB1P35222 781 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 SERPINB8P50452 374 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 NEK3P51956 506 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 LIMK2P53671 638 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 SEC24CP53992 1094 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 PDE1BQ01064 536 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 NSUN2Q08J23 767 aaKnown RBP eCLIP10.33□□□□□ -0.76
MSH5-213ENST00000468136 EFTUD2Q15029 972 aaKnown RBP eCLIP10.33□□□□□ -0.762e-16■■■■■ 41.1
MSH5-213ENST00000468136 MPPE1Q53F39 396 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 PPM1LQ5SGD2 360 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 IL31Q6EBC2 164 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 DENND5AQ6IQ26 1287 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 TRMT10BQ6PF06 316 aaKnown RBP10.33□□□□□ -0.76
MSH5-213ENST00000468136 LVRNQ6Q4G3 990 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 ARHGAP36Q6ZRI8 547 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 KCNMB4Q86W47 210 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 C4orf33Q8N1A6 199 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 GBP7Q8N8V2 638 aaPredicted RBP10.33□□□□□ -0.76
MSH5-213ENST00000468136 ZNF398Q8TD17 642 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 USP33Q8TEY7 942 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 SREK1Q8WXA9 508 aaKnown RBP10.33□□□□□ -0.76
MSH5-213ENST00000468136 ACDQ96AP0 544 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 TMA16Q96EY4 203 aaKnown RBP10.33□□□□□ -0.76
MSH5-213ENST00000468136 IFT43Q96FT9 208 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 MRGPRX2Q96LB1 330 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 TGS1Q96RS0 853 aaKnown RBP10.33□□□□□ -0.76
MSH5-213ENST00000468136 RBBP8Q99708 897 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 TCF25Q9BQ70 676 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 FICDQ9BVA6 458 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 CINPQ9BW66 212 aaPredicted RBP10.33□□□□□ -0.76
MSH5-213ENST00000468136 ARHGAP26Q9UNA1 814 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 SH3BP1Q9Y3L3 701 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 STARD13Q9Y3M8 1113 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 NR2E3Q9Y5X4 410 aa10.33□□□□□ -0.76
MSH5-213ENST00000468136 A0A1W2PPM1 405 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 C2orf71A6NGG8 1288 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 CXorf49A8MYA2 514 aaPredicted RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 TCP11X1B4DZS4 312 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 J3KR12 359 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 ZNF197O14709 1029 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 SLC7A4O43246 635 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 SPAG7O75391 227 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 RFPL1O75677 317 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 LUC7L3O95232 432 aaKnown RBP10.32□□□□□ -0.76
MSH5-213ENST00000468136 NDST3O95803 873 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 KLKB1P03952 638 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 CYBBP04839 570 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 ITGA2BP08514 1039 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 PYGBP11216 843 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 COL6A2P12110 1019 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 CREB1P16220 341 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 PTPN2P17706 415 aa10.32□□□□□ -0.76
MSH5-213ENST00000468136 HOXD9P28356 352 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms