RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 PRKCHP24723 683 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 SEC13P55735 322 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 LMNB2Q03252 620 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 SIGLEC14Q08ET2 396 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 NIPAL4Q0D2K0 466 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 DHX34Q14147 1143 aaKnown RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 ZNF235Q14590 738 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 DLG2Q15700 870 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 P3H1Q32P28 736 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 HNRNPA1L2Q32P51 320 aaKnown RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 FBXO43Q4G163 708 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 FNDC3BQ53EP0 1204 aaKnown RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 ANKRD20A2Q5SQ80 823 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 ANKRD20A1Q5TYW2 823 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 ANKRD20A3Q5VUR7 823 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 PRUNE1Q86TP1 453 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CTAGE6Q86UF2 777 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CTAGE4Q8IX94 777 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 PLPP6Q8IY26 295 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CCDC105Q8IYK2 499 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 MMGT1Q8N4V1 131 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 PCDH20Q8N6Y1 951 aaKnown RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 ZNF513Q8N8E2 541 aaPredicted RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 IL17RCQ8NAC3 791 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 ATP11CQ8NB49 1132 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 ARRDC2Q8TBH0 407 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CCDC110Q8TBZ0 833 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 NSMCE1Q8WV22 266 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 EDAQ92838 391 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 TADA1Q96BN2 335 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 SHDQ96IW2 340 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CCDC114Q96M63 670 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 GABRG3Q99928 467 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CINPQ9BW66 212 aaPredicted RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 TBC1D17Q9HA65 648 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CD248Q9HCU0 757 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 NT5MQ9NPB1 228 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 CACNA2D2Q9NY47 1150 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 TRHDEQ9UKU6 1024 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 NDRG2Q9UN36 371 aaKnown RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 MTF2Q9Y483 593 aaPredicted RBP11.32□□□□□ -0.6
VCP-204ENST00000466100 VPS13AQ96RL7 3174 aa11.32□□□□□ -0.6
VCP-204ENST00000466100 WASH3PC4AMC7 463 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 BHMG1C9JSJ3 638 aaPredicted RBP11.31□□□□□ -0.6
VCP-204ENST00000466100 TTI1O43156 1089 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 RAD51CO43502 376 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 DCXO43602 365 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 RNF40O75150 1001 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 GJB3O75712 270 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 ECEL1O95672 775 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 MMP2P08253 660 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 C7P10643 843 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 HLA-EP13747 358 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 NFKB1P19838 968 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 RPL22P35268 128 aaKnown RBP11.31□□□□□ -0.6
VCP-204ENST00000466100 TIE1P35590 1138 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 HSPA9P38646 679 aaKnown RBP11.31□□□□□ -0.6
VCP-204ENST00000466100 CSNK1DP48730 415 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 MAXP61244 160 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 RHOAP61586 193 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 ST8SIA6P61647 398 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 MRPS21P82921 87 aaKnown RBP11.31□□□□□ -0.6
VCP-204ENST00000466100 DR1Q01658 176 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 NSUN2Q08J23 767 aaKnown RBP eCLIP11.31□□□□□ -0.6
VCP-204ENST00000466100 PTK6Q13882 451 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 PKN3Q6P5Z2 889 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 Q6ZS52 159 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 Q6ZVU0 165 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 JAMLQ86YT9 394 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 ZNF366Q8N895 744 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 OR2A12Q8NGT7 310 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 GRK7Q8WTQ7 553 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 PTPRN2Q92932 1015 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 EXOC2Q96KP1 924 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 AGAP3Q96P47 875 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 FERMT1Q9BQL6 677 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 OSBPL6Q9BZF3 934 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 TM6SF2Q9BZW4 377 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 POLR1EQ9GZS1 481 aaKnown RBP11.31□□□□□ -0.6
VCP-204ENST00000466100 GBA3Q9H227 469 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 TNKS2Q9H2K2 1166 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 MTG2Q9H4K7 406 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 GLOD4Q9HC38 313 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 PLA2G4CQ9UP65 541 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 MRPS17Q9Y2R5 130 aaKnown RBP11.31□□□□□ -0.6
VCP-204ENST00000466100 STON1Q9Y6Q2 735 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
VCP-204ENST00000466100 WDR87Q6ZQQ6 2873 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 EDDM13A0A1B0GTR0 161 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 TTC24A2A3L6 582 aaPredicted RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 INSIG1O15503 277 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 STK10O94804 968 aaKnown RBP11.3□□□□□ -0.6
VCP-204ENST00000466100 METTL18O95568 372 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 GAS8O95995 478 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 IFNB1P01574 187 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 KRT14P02533 472 aa11.3□□□□□ -0.6
VCP-204ENST00000466100 IVDP26440 423 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms