RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CCDC34Q96HJ3 373 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 C2orf49Q9BVC5 232 aaPredicted RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 SCAND2PQ9GZW5 306 aaPredicted RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 INTS2Q9H0H0 1204 aaKnown RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 TNKS2Q9H2K2 1166 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 ANLNQ9NQW6 1124 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 DYRK4Q9NR20 520 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 HS3ST3A1Q9Y663 406 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 CSNK1G3Q9Y6M4 447 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 WASF2Q9Y6W5 498 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 SPTAN1Q13813 2472 aaKnown RBP12.03□□□□□ -0.48
CNOT4-208ENST00000465721 TEX15Q9BXT5 2789 aa12.03□□□□□ -0.48
CNOT4-208ENST00000465721 A0A0D9SEW6 157 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 CPED1A4D0V7 1026 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 H3BM21 787 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 ARHGAP6O43182 974 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 SPINT1O43278 529 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 ATMINO43313 823 aaPredicted RBP12.02□□□□□ -0.49
CNOT4-208ENST00000465721 AQP9O43315 295 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 MED7O43513 233 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 ZNF821O75541 412 aaPredicted RBP12.02□□□□□ -0.49
CNOT4-208ENST00000465721 DAB1O75553 588 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 LEFTY1O75610 366 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 GRAP2O75791 330 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 WISP1O95388 367 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 RHOCP08134 193 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 ADRB3P13945 408 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 ITGB7P26010 798 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 RBMS1P29558 406 aaKnown RBP12.02□□□□□ -0.49
CNOT4-208ENST00000465721 GNA15P30679 374 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 RABIFP47224 123 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 NEK3P51956 506 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 RPS21P63220 83 aaKnown RBP12.02□□□□□ -0.49
CNOT4-208ENST00000465721 KRT83P78385 493 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 CETN1Q12798 172 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 NME3Q13232 169 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 MTA1Q13330 715 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 DEFB133Q30KQ1 61 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 ARTNQ5T4W7 220 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 KIAA1161Q6NSJ0 714 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 CRTC1Q6UUV9 634 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 OLFML1Q6UWY5 402 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 LINGO4Q6UY18 593 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 DPY19L3Q6ZPD9 716 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 FAM183BPQ6ZVS7 135 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 TRIM59Q8IWR1 403 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 WDTC1Q8N5D0 677 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 PPP1R16AQ96I34 528 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 KLF6Q99612 283 aaPredicted RBP12.02□□□□□ -0.49
CNOT4-208ENST00000465721 SLC17A9Q9BYT1 436 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 NCKIPSDQ9NZQ3 722 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 IL36AQ9UHA7 158 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 FADS3Q9Y5Q0 445 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 SDK2Q58EX2 2172 aa12.02□□□□□ -0.49
CNOT4-208ENST00000465721 BECN2A8MW95 431 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 TCEA3O75764 348 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 MLLT3P42568 568 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-208ENST00000465721 KCNC4Q03721 635 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 EIF2B5Q13144 721 aaKnown RBP12.01□□□□□ -0.49
CNOT4-208ENST00000465721 PDE1CQ14123 709 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-208ENST00000465721 ARSIQ5FYB1 569 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 EFHC1Q5JVL4 640 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 PARS2Q7L3T8 475 aaKnown RBP12.01□□□□□ -0.49
CNOT4-208ENST00000465721 SLC35F3Q8IY50 421 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 RBFAQ8N0V3 343 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 CCDC97Q96F63 343 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-208ENST00000465721 DHTKD1Q96HY7 919 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-208ENST00000465721 BOCQ9BWV1 1114 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 SIK2Q9H0K1 926 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 PIGVQ9NUD9 493 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 ZNF212Q9UDV6 495 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 SALL4Q9UJQ4 1053 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 PNMA8BQ9ULN7 279 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-208ENST00000465721 SNX10Q9Y5X0 201 aa12.01□□□□□ -0.49
CNOT4-208ENST00000465721 USP9YO00507 2555 aaPredicted RBP12.01□□□□□ -0.49
CNOT4-208ENST00000465721 SPTBN1Q01082 2364 aaKnown RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 USP9XQ93008 2570 aaPredicted RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 CCDC187A0A096LP49 1063 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 TPP1O14773 563 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 MUSKO15146 869 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 AP1G1O43747 822 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 ZMPSTE24O75844 475 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 SMC2O95347 1197 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 ADCY5O95622 1261 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 PAK4O96013 591 aaPredicted RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 ERBB2P04626 1255 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 ITGA2BP08514 1039 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 JUNDP17535 347 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 TFE3P19532 575 aaPredicted RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 ABL2P42684 1182 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 MARSP56192 900 aaKnown RBP12□□□□□ -0.49
CNOT4-208ENST00000465721 PFN3P60673 137 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 NR0B2Q15466 257 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 ARL13BQ3SXY8 428 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 PTPN20Q4JDL3 420 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 GJB7Q6PEY0 223 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 FOXR2Q6PJQ5 311 aa12□□□□□ -0.49
CNOT4-208ENST00000465721 CCDC81Q6ZN84 652 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms