RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 C1QTNF3-AMACRE9PGA6 284 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 RNF103O00237 685 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 ALOX15BO15296 676 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 MFSD11O43934 449 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 GFRA3O60609 400 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 PALMO75781 387 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 RNASEH2AO75792 299 aaKnown RBP12.59□□□□□ -0.39
CHPF2-202ENST00000465601 MAP3K6O95382 1288 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 ADH1BP00325 375 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 IGLV3-19P01714 112 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 C5AR1P21730 350 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 GKP32189 559 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 ACSL1P33121 698 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 DHPSP49366 369 aaPredicted RBP12.59□□□□□ -0.39
CHPF2-202ENST00000465601 CCNHP51946 323 aaPredicted RBP12.59□□□□□ -0.39
CHPF2-202ENST00000465601 RHOAP61586 193 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 SNRPD1P62314 119 aaKnown RBP12.59□□□□□ -0.39
CHPF2-202ENST00000465601 GBE1Q04446 702 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 IL10RBQ08334 325 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 GSE1Q14687 1217 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 IFI16Q16666 785 aaKnown RBP12.59□□□□□ -0.39
CHPF2-202ENST00000465601 FAM46CQ5VWP2 391 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 ARMCX6Q7L4S7 300 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 ALYREFQ86V81 257 aaKnown RBP12.59□□□□□ -0.39
CHPF2-202ENST00000465601 RFX6Q8HWS3 928 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 HDDC3Q8N4P3 179 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 DCLK2Q8N568 766 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 LRRC57Q8N9N7 239 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 TMIEQ8NEW7 156 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 OR6K2Q8NGY2 324 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 GRIN3AQ8TCU5 1115 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 CASKIN2Q8WXE0 1202 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 HEPHQ9BQS7 1158 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 GPR174Q9BXC1 333 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 NEUROG2Q9H2A3 272 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 NCDNQ9UBB6 729 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 IL36AQ9UHA7 158 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 GMEB2Q9UKD1 530 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 GUCA1BQ9UMX6 200 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 SCML1Q9UN30 329 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 NCKAP1Q9Y2A7 1128 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 WASF2Q9Y6W5 498 aa12.59□□□□□ -0.39
CHPF2-202ENST00000465601 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 SPTBN4Q9H254 2564 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 ZNF487B1APH4 448 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 KPNA3O00505 521 aaPredicted RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 NRDCO43847 1150 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 LEFTY1O75610 366 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 ZRANB2O95218 330 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 GSRP00390 522 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 PRNPP04156 253 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 PTMAP06454 111 aaKnown RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 RETP07949 1114 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 LAMA1P25391 3075 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 DRD3P35462 400 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 CDKN2BP42772 138 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 PTGER3P43115 390 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 SFSWAPQ12872 951 aaKnown RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 SLC10A2Q12908 348 aaPredicted RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 MYLK3Q32MK0 819 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 SPOCD1Q6ZMY3 1216 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 VSIG1Q86XK7 387 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 KATNAL2Q8IYT4 538 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 RCOR2Q8IZ40 523 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 ATPAF2Q8N5M1 289 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 OR2AP1Q8NGE2 309 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 LRRN4Q8WUT4 740 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 RUBCNQ92622 972 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 ARRDC3Q96B67 414 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 LOXL4Q96JB6 756 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 EXOC2Q96KP1 924 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 ZNF830Q96NB3 372 aaPredicted RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 HINFPQ9BQA5 517 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 TSGA10Q9BZW7 698 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 BTBD1Q9H0C5 482 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 ARRDC1-AS1Q9H2J1 176 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 ZDHHC6Q9H6R6 413 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 LHX3Q9UBR4 397 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 EVLQ9UI08 416 aaPredicted RBP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 AMFRQ9UKV5 643 aa12.58□□□□□ -0.4
CHPF2-202ENST00000465601 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHPF2-202ENST00000465601 FAM47DPA6NHR8 397 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 KRIT1O00522 736 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 APOL1O14791 398 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 INSIG1O15503 277 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 KRT86O43790 486 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 MAFKO60675 156 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 EPN2O95208 641 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 POP4O95707 220 aaKnown RBP12.57□□□□□ -0.4
CHPF2-202ENST00000465601 SEMA4FO95754 770 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 FTCDO95954 541 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 IGSF6O95976 241 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 CCDC175P0C221 793 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 KRT10P13645 584 aa12.57□□□□□ -0.4
CHPF2-202ENST00000465601 CTNNA1P35221 906 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms