RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 FARP1Q9Y4F1 1045 aaPredicted RBP20.67■□□□□ 0.9
SKA3-205ENST00000465471 CAPN6Q9Y6Q1 641 aa20.67■□□□□ 0.9
SKA3-205ENST00000465471 C10orf142B7Z368 130 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 RNF103O00237 685 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 BNIP3LO60238 219 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 EPN2O95208 641 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 IL1BP01584 269 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 CCDC175P0C221 793 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 RECQLP46063 649 aaPredicted RBP20.66■□□□□ 0.9
SKA3-205ENST00000465471 RFTN1Q14699 578 aaPredicted RBP20.66■□□□□ 0.9
SKA3-205ENST00000465471 FAM46CQ5VWP2 391 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 LPCAT2Q7L5N7 544 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 NT5DC3Q86UY8 548 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 ATPAF2Q8N5M1 289 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 EXD1Q8NHP7 514 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 RNF25Q96BH1 459 aaPredicted RBP20.66■□□□□ 0.9
SKA3-205ENST00000465471 HEPHQ9BQS7 1158 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 FBXL12Q9NXK8 326 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 IL36AQ9UHA7 158 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.66■□□□□ 0.9
SKA3-205ENST00000465471 PCDHA3Q9Y5H8 950 aa20.66■□□□□ 0.9
SKA3-205ENST00000465471 RIF1Q5UIP0 2472 aaKnown RBP20.65■□□□□ 0.9
SKA3-205ENST00000465471 SHROOM3Q8TF72 1996 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 A0A1W2PP55 124 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 CCDC66A2RUB6 948 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 C1QTNF3-AMACRE9PGA6 284 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 KRT86O43790 486 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 NRDCO43847 1150 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 PALMO75781 387 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 PRNPP04156 253 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 ACSL1P33121 698 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 GARSP41250 739 aaKnown RBP20.65■□□□□ 0.9
SKA3-205ENST00000465471 PEX5P50542 639 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 SNRPD1P62314 119 aaKnown RBP20.65■□□□□ 0.9
SKA3-205ENST00000465471 RPL6Q02878 288 aaKnown RBP20.65■□□□□ 0.9
SKA3-205ENST00000465471 GBE1Q04446 702 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 SFSWAPQ12872 951 aaKnown RBP20.65■□□□□ 0.9
SKA3-205ENST00000465471 SLC10A2Q12908 348 aaPredicted RBP20.65■□□□□ 0.9
SKA3-205ENST00000465471 SPOCD1Q6ZMY3 1216 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 SYCE1Q8N0S2 351 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 FATE1Q969F0 183 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 GDAP1L1Q96MZ0 367 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 PCED1AQ9H1Q7 454 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 DTLQ9NZJ0 730 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 HECAQ9UBI9 543 aaPredicted RBP20.65■□□□□ 0.9
SKA3-205ENST00000465471 ZNF292O60281 2723 aa20.65■□□□□ 0.9
SKA3-205ENST00000465471 SDK1Q7Z5N4 2213 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 MAP3K13O43283 966 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 LEFTY1O75610 366 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 ZRANB2O95218 330 aaKnown RBP eCLIP20.64■□□□□ 0.89
SKA3-205ENST00000465471 RETP07949 1114 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 RHOAP61586 193 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 ATXN7L2Q5T6C5 722 aaPredicted RBP20.64■□□□□ 0.89
SKA3-205ENST00000465471 TMCO4Q5TGY1 634 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 SLC41A1Q8IVJ1 513 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 TMEFF1Q8IYR6 380 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 RCOR2Q8IZ40 523 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 CADM4Q8NFZ8 388 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 GRIN3AQ8TCU5 1115 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 ANP32BQ92688 251 aaKnown RBP20.64■□□□□ 0.89
SKA3-205ENST00000465471 ZNF419Q96HQ0 510 aaPredicted RBP20.64■□□□□ 0.89
SKA3-205ENST00000465471 RBM41Q96IZ5 413 aaKnown RBP20.64■□□□□ 0.89
SKA3-205ENST00000465471 LRIG1Q96JA1 1093 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 TSGA13Q96PP4 275 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 BTBD1Q9H0C5 482 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 KCNF1Q9H3M0 494 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 SGK2Q9HBY8 427 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 PCDHGA5Q9Y5G8 931 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 EP300Q09472 2414 aaPredicted RBP20.64■□□□□ 0.89
SKA3-205ENST00000465471 FAM186AA6NE01 2351 aa20.64■□□□□ 0.89
SKA3-205ENST00000465471 GVINP1Q7Z2Y8 2422 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 hCG_1818297A0A087WSY0 165 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 APOL1O14791 398 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 SLC7A4O43246 635 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 GFRA3O60609 400 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 RNASEH2AO75792 299 aaKnown RBP20.63■□□□□ 0.89
SKA3-205ENST00000465471 IGSF6O95976 241 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 ZFXP17010 805 aaPredicted RBP20.63■□□□□ 0.89
SKA3-205ENST00000465471 PTGER3P43115 390 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 CSNK1DP48730 415 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 DNA2P51530 1060 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 SLC10A7Q0GE19 358 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 PPP2R5EQ16537 467 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 MYLK3Q32MK0 819 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 ARSIQ5FYB1 569 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 TFDP3Q5H9I0 405 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 AGBL4Q5VU57 503 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 FAM124AQ86V42 546 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 RUBCNQ92622 972 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 ALG3Q92685 438 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 ARRDC3Q96B67 414 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 OLFM3Q96PB7 478 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 PSKH2Q96QS6 385 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 OMDQ99983 421 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 GPR174Q9BXC1 333 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 NEUROG2Q9H2A3 272 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 NCKAP1Q9Y2A7 1128 aa20.63■□□□□ 0.89
SKA3-205ENST00000465471 MUSKO15146 869 aa20.62■□□□□ 0.89
SKA3-205ENST00000465471 NDUFS2O75306 463 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms