RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 RAD51BO15315 384 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 NVLO15381 856 aaKnown RBP7.9□□□□□ -1.14
SMC3-202ENST00000462899 POLR2DO15514 142 aaKnown RBP7.9□□□□□ -1.14
SMC3-202ENST00000462899 AQP9O43315 295 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 CUTAO60888 179 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 GCATO75600 419 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 GJB6O95452 261 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 AVPP01185 164 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 LCP1P13796 627 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 PDGFRAP16234 1089 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 PDCP20941 246 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 TACR2P21452 398 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 AKT2P31751 481 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 CCKBRP32239 447 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 GTF2H1P32780 548 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 UGT1A5P35504 534 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 NUMBP49757 651 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 EIF2B5Q13144 721 aaKnown RBP7.9□□□□□ -1.14
SMC3-202ENST00000462899 MORC3Q14149 939 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 NR0B2Q15466 257 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 DEFB133Q30KQ1 61 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 ZCWPW2Q504Y3 356 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 RAP1GAP2Q684P5 730 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 OR6B2Q6IFH4 312 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 LCLAT1Q6UWP7 414 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 USP53Q70EK8 1073 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 BEND5Q7L4P6 421 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 TAC4Q86UU9 113 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 CIR1Q86X95 450 aaPredicted RBP7.9□□□□□ -1.14
SMC3-202ENST00000462899 LGI2Q8N0V4 545 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 CCAR2Q8N163 923 aaKnown RBP7.9□□□□□ -1.14
SMC3-202ENST00000462899 SH2D3CQ8N5H7 860 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 FBXL13Q8NEE6 735 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 OR2A12Q8NGT7 310 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 UBA3Q8TBC4 463 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 ZNF564Q8TBZ8 553 aaPredicted RBP7.9□□□□□ -1.14
SMC3-202ENST00000462899 TFAP2BQ92481 460 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 TBATAQ96M53 351 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 SERPINB11Q96P15 392 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 KCTD15Q96SI1 283 aaPredicted RBP7.9□□□□□ -1.14
SMC3-202ENST00000462899 CCDC3Q9BQI4 270 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 HDAC8Q9BY41 377 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 DNAI2Q9GZS0 605 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 ADNPQ9H2P0 1102 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 RAB20Q9NX57 234 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 HS3ST2Q9Y278 367 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 FRMD4BQ9Y2L6 1034 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 COQ4Q9Y3A0 265 aa7.9□□□□□ -1.14
SMC3-202ENST00000462899 MED13Q9UHV7 2174 aa7.9□□□□□ -1.15
SMC3-202ENST00000462899 CSMD2Q7Z408 3487 aa7.9□□□□□ -1.15
SMC3-202ENST00000462899 C2CD3Q4AC94 2353 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 SHANK1Q9Y566 2161 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 A0A1W2PQM1 296 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 CPED1A4D0V7 1026 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 TCAF2A6NFQ2 919 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.89□□□□□ -1.15
SMC3-202ENST00000462899 D6RAR5 112 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 MUSKO15146 869 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 YEATS4O95619 227 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 VDRP11473 427 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 SRCP12931 536 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 PDIA4P13667 645 aaKnown RBP7.89□□□□□ -1.15
SMC3-202ENST00000462899 HGFP14210 728 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 NR2F2P24468 414 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 NNMTP40261 264 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 AFMP43652 599 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 RABIFP47224 123 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 RGS7P49802 495 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 MXI1P50539 228 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 IRAK1P51617 712 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 WDR4P57081 412 aaKnown RBP7.89□□□□□ -1.15
SMC3-202ENST00000462899 PFN3P60673 137 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 CUL2Q13617 745 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 SPIDRQ14159 915 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 DLG2Q15700 870 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 TTC39BQ5VTQ0 682 aaPredicted RBP7.89□□□□□ -1.15
SMC3-202ENST00000462899 FOXR1Q6PIV2 292 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 PTAR1Q7Z6K3 402 aaPredicted RBP7.89□□□□□ -1.15
SMC3-202ENST00000462899 C14orf80Q86SX3 495 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 CCDC117Q8IWD4 279 aaPredicted RBP7.89□□□□□ -1.15
SMC3-202ENST00000462899 FAM186BQ8IYM0 893 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 RBFAQ8N0V3 343 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 TMIEQ8NEW7 156 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 NAT6Q93015 286 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 VOPP1Q96AW1 172 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 BTN2A3PQ96KV6 586 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 HSFY1Q96LI6 401 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 PSMB7Q99436 277 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 FEM1AQ9BSK4 669 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 LRRC61Q9BV99 259 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 CLPBQ9H078 707 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 TCEAL2Q9H3H9 227 aaPredicted RBP7.89□□□□□ -1.15
SMC3-202ENST00000462899 ZFAND3Q9H8U3 227 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 PRM3Q9NNZ6 103 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 HESX1Q9UBX0 185 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 NAALADL1Q9UQQ1 740 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 MAP4K5Q9Y4K4 846 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 CEP83Q9Y592 693 aa7.89□□□□□ -1.15
SMC3-202ENST00000462899 KCNU1A8MYU2 1149 aa7.88□□□□□ -1.15
SMC3-202ENST00000462899 LMO7DNF2Z398 122 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms