RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 DCBLD1Q8N8Z6 715 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 TMEM145Q8NBT3 493 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 JOSD2Q8TAC2 188 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 PTCD2Q8WV60 388 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 SKA1Q96BD8 255 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 FCRL3Q96P31 734 aaPredicted RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 AGPAT1Q99943 283 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 EDEM3Q9BZQ6 932 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 RAB6CQ9H0N0 254 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 KDM4CQ9H3R0 1056 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 TSPY26PQ9H489 355 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 ARHGEF38Q9NXL2 777 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 RRN3Q9NYV6 651 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 AIPL1Q9NZN9 384 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 COX16Q9P0S2 106 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 IFNKQ9P0W0 207 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 OR51B4Q9Y5P0 310 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 SNX10Q9Y5X0 201 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 HS3ST4Q9Y661 456 aa8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 SPENQ96T58 3664 aaKnown RBP8.12□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3DA0A087WVF3 549 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3IA0A087WXS9 549 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3EA0A087X179 549 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3KA0A087X1G2 549 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 LY6G6EA0A0G2JKS1 128 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 A0A1B0GVM2 712 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 A0A1W2PQJ5 194 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3FA6NER0 549 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TCAF2A6NFQ2 919 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3LB9A6J9 549 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 F5H5T6 163 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 GOLGA6L19H0YKK7 550 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 M0QYT0 321 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 SIGLEC6O43699 453 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 ATP9BO43861 1147 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 GYPCP04921 128 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 CTSLP07711 333 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3HP0C7X1 549 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 CKMT2P17540 419 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 CCR1P32246 355 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 CXCR3P49682 368 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 SNX16P57768 344 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 RNASE9P60153 205 aaKnown RBP8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 FOXK1P85037 733 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TLE3Q04726 772 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 NME3Q13232 169 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC12A1Q13621 1099 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 ASIC2Q16515 512 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 C15orf59Q2T9L4 293 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC25A52Q3SY17 297 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 POM121L1PQ3SYA9 428 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC45A4Q5BKX6 768 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 PPP1R15BQ5SWA1 713 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 PIP5KL1Q5T9C9 394 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TTC39BQ5VTQ0 682 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 DMRTA1Q5VZB9 504 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 RNF219Q5W0B1 726 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 HGSNATQ68CP4 663 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3GQ6DHY5 549 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3CQ6IPX1 549 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 FBXL22Q6P050 247 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 Q6ZVU0 165 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 C14orf80Q86SX3 495 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 ZNF683Q8IZ20 524 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D3Q8IZP1 549 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLC25A45Q8N413 288 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 MSANTD4Q8NCY6 345 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 CFAP57Q96MR6 1250 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 XPO4Q9C0E2 1151 aaKnown RBP8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 HAUS4Q9H6D7 363 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 TMPRSS4Q9NRS4 437 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 UCKL1Q9NWZ5 548 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 ADAM22Q9P0K1 906 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 PPM1HQ9ULR3 514 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 CLCA2Q9UQC9 943 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 DMTF1Q9Y222 760 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 PCDHB1Q9Y5F3 818 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 AK5Q9Y6K8 562 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 U3KQA8 63 aa8.11□□□□□ -1.11
CDC42BPA-210ENST00000462553 UNC13CQ8NB66 2214 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 EIF4E1BA6NMX2 242 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 DDX3XO00571 662 aaKnown RBP eCLIP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 MCF2LO15068 1137 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 ALOX15BO15296 676 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 PAGE1O75459 146 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 ENDOD1O94919 500 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 CALB1P05937 261 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 PLA2G2AP14555 144 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 PRLRP16471 622 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 GLDCP23378 1020 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 NUDT1P36639 197 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 NSFP46459 744 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 TPM4P67936 248 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 SULT2A1Q06520 285 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 OVGP1Q12889 678 aa8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 AUHQ13825 339 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-210ENST00000462553 TBC1D25Q3MII6 688 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms