RNA–Protein interactions for RNA: ENST00000462400.1

TNRC6A-204, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 2,550 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-204ENST00000462400 VWCEQ96DN2 955 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 CNGB3Q9NQW8 809 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 IGSF5Q9NSI5 407 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 DDIT4Q9NX09 232 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 UBAP1Q9NZ09 502 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 SIRPGQ9P1W8 387 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 APPL1Q9UKG1 709 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 FZD10Q9ULW2 581 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 POMPQ9Y244 141 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 SLC27A5Q9Y2P5 690 aa12.21□□□□□ -0.45
TNRC6A-204ENST00000462400 TANC1Q9C0D5 1861 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 MYOCOSA0A1B0GUC4 107 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 F5H423 210 aaPredicted RBP12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 AVILO75366 819 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 PEX14O75381 377 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 ALDH2P05091 517 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 SCNN1AP37088 669 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 SLC5A3P53794 718 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 IRX4P78413 519 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 PEX6Q13608 980 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 PDK2Q15119 407 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 CTXN3Q4LDR2 81 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 FNDC1Q4ZHG4 1894 aaPredicted RBP12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 HSP90AA5PQ58FG0 334 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 RTP2Q5QGT7 225 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 BSPRYQ5W0U4 402 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 PAOXQ6QHF9 649 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 PRSS55Q6UWB4 352 aaPredicted RBP12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 STRADAQ7RTN6 431 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 ANKRD33Q7Z3H0 272 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 SLC26A11Q86WA9 606 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 NPAS4Q8IUM7 802 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 TP53INP2Q8IXH6 220 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 GAB3Q8WWW8 586 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 PAWRQ96IZ0 340 aaKnown RBP12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 CSPG4P5Q96PW8 444 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 TMEM39AQ9NV64 488 aa12.21□□□□□ -0.46
TNRC6A-204ENST00000462400 KRT37O76014 449 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 SNRPAP09012 282 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 ALDH1A3P47895 512 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 COG7P83436 770 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 STX3Q13277 289 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 DCTN2Q13561 401 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 NOMO1Q15155 1222 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 DPYSL2Q16555 572 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 FAXCQ5TGI0 409 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 DEFB107AQ8IZN7 70 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 MARVELD2Q8N4S9 558 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 TTC13Q8NBP0 860 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 DCUN1D1Q96GG9 259 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 CNBD2Q96M20 576 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 RBM38Q9H0Z9 239 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 TIMMDC1Q9NPL8 285 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 STAP1Q9ULZ2 295 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 DMTF1Q9Y222 760 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 EFR3BQ9Y2G0 817 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 MICAL3Q7RTP6 2002 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 SF3B1O75533 1304 aaKnown RBP eCLIP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 CXorf49A8MYA2 514 aaPredicted RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 CASQ2O14958 399 aaPredicted RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 FBXO21O94952 628 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 GALTP07902 379 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 TSHRP16473 764 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 RPL17P18621 184 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 RBL1P28749 1068 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 EMP3P54852 163 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 RPL26P61254 145 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 ROR1Q01973 937 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 WASHC5Q12768 1159 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 TFDP2Q14188 446 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 CNGA3Q16281 694 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 LRRC26Q2I0M4 334 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 FUT10Q6P4F1 479 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 IYDQ6PHW0 289 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 ARCQ7LC44 396 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 TAC4Q86UU9 113 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 CRIPAKQ8N1N5 446 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 PPP1R14CQ8TAE6 165 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 NT5C3BQ969T7 300 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 MRPL1Q9BYD6 325 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 CRISPLD2Q9H0B8 497 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 CRISPLD1Q9H336 500 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 XAB2Q9HCS7 855 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 WDR6Q9NNW5 1121 aaKnown RBP12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 SFMBT1Q9UHJ3 866 aa12.2□□□□□ -0.46
TNRC6A-204ENST00000462400 MYO16Q9Y6X6 1858 aa12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 LOC100653049A0A140TA62 436 aa12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 H3BNX3 289 aa12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 KCNN4O15554 427 aa12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 MSI1O43347 362 aaKnown RBP12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 DNAJA2O60884 412 aa12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 SNNO75324 88 aaPredicted RBP12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 LYPLA1O75608 230 aaPredicted RBP12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 KRT34O76011 436 aa12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 OAZ2O95190 189 aa12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 TOP3BO95985 862 aaKnown RBP12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 SULT2A1Q06520 285 aa12.19□□□□□ -0.46
TNRC6A-204ENST00000462400 GK3PQ14409 553 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms