RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 C8orf33Q9H7E9 229 aaPredicted RBP13.7□□□□□ -0.22
PBRM1-219ENST00000462207 PAK5Q9P286 719 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 SEPT3Q9UH03 358 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 RSPH14Q9UHP6 348 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 SNX24Q9Y343 169 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 CTIFO43310 598 aaKnown RBP13.7□□□□□ -0.22
PBRM1-219ENST00000462207 EGFP01133 1207 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 IVDP26440 423 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 RPL21P46778 160 aaKnown RBP13.7□□□□□ -0.22
PBRM1-219ENST00000462207 SEC13P55735 322 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 RHOAP61586 193 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 SULT2A1Q06520 285 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ITKQ08881 620 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 NIPAL4Q0D2K0 466 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 IHHQ14623 411 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 RFTN1Q14699 578 aaPredicted RBP13.7□□□□□ -0.22
PBRM1-219ENST00000462207 EIF4HQ15056 248 aaKnown RBP13.7□□□□□ -0.22
PBRM1-219ENST00000462207 DGKKQ5KSL6 1271 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 EGFLAMQ63HQ2 1017 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 C22orf39Q6P5X5 142 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 SPATA22Q8NHS9 363 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 NSMCE3Q96MG7 304 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 PSKH2Q96QS6 385 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ACOX2Q99424 681 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 MGME1Q9BQP7 344 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ERP44Q9BS26 406 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ANKZF1Q9H8Y5 726 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 GLOD4Q9HC38 313 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 RAB6BQ9NRW1 208 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 UBP1Q9NZI7 540 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 TRHDEQ9UKU6 1024 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 ATP8A1Q9Y2Q0 1164 aa13.7□□□□□ -0.22
PBRM1-219ENST00000462207 TTC34A8MYJ7 566 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 K7EQS6 105 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 ZNF821O75541 412 aaPredicted RBP13.69□□□□□ -0.22
PBRM1-219ENST00000462207 ATP5BP06576 529 aaKnown RBP13.69□□□□□ -0.22
PBRM1-219ENST00000462207 ADCY8P40145 1251 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 GEMIN4P57678 1058 aaKnown RBP13.69□□□□□ -0.22
PBRM1-219ENST00000462207 BASP1P80723 227 aaKnown RBP13.69□□□□□ -0.22
PBRM1-219ENST00000462207 MLF2Q15773 248 aaPredicted RBP13.69□□□□□ -0.22
PBRM1-219ENST00000462207 GLE1Q53GS7 698 aaKnown RBP13.69□□□□□ -0.22
PBRM1-219ENST00000462207 INO80DQ53TQ3 878 aaPredicted RBP13.69□□□□□ -0.22
PBRM1-219ENST00000462207 DUPD1Q68J44 220 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 Q6ZVU0 165 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 OR6K2Q8NGY2 324 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 UBXN4Q92575 508 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 ERLEC1Q96DZ1 483 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 ETNK1Q9HBU6 452 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 MUTYHQ9UIF7 546 aa13.69□□□□□ -0.22
PBRM1-219ENST00000462207 TCRBV7S3A2A0A539 114 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 BHMG1C9JSJ3 638 aaPredicted RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 BNIP3LO60238 219 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ASLP04424 464 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 CHRM1P11229 460 aaPredicted RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 HLA-EP13747 358 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ACTN2P35609 894 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ZNF234Q14588 700 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 DLG2Q15700 870 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ACCSLQ4AC99 568 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 FNDC3BQ53EP0 1204 aaKnown RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 TMEM196Q5HYL7 178 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ANKRD22Q5VYY1 191 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ARRDC2Q8TBH0 407 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 FRS2Q8WU20 508 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 CASKIN2Q8WXE0 1202 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 OXNAD1Q96HP4 312 aaPredicted RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 SEMA3CQ99985 751 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 MLPHQ9BV36 600 aaPredicted RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 RAB17Q9H0T7 212 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 EPB41L5Q9HCM4 733 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 GRHL1Q9NZI5 618 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 UTP11Q9Y3A2 253 aaKnown RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 KRBA1A5PL33 1030 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 WASH3PC4AMC7 463 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 INSIG1O15503 277 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ATP9BO43861 1147 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ZNF189O75820 626 aaPredicted RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 MT-CYBP00156 380 aaPredicted RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 MMP2P08253 660 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 PRKCHP24723 683 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 GKP32189 559 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 SLC20A2Q08357 652 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 OLIG2Q13516 323 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 IZUMO3Q5VZ72 239 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ITPRIPL1Q6GPH6 555 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 CCDC70Q6NSX1 233 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 PRPF39Q86UA1 669 aaKnown RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 BBS5Q8N3I7 341 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 FAM3CQ92520 227 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 CPT1BQ92523 772 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 RBM15Q96T37 977 aaKnown RBP eCLIP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 POLR1EQ9GZS1 481 aaKnown RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 ARHGEF3Q9NR81 526 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 CACNA2D2Q9NY47 1150 aa13.68□□□□□ -0.22
PBRM1-219ENST00000462207 NDRG2Q9UN36 371 aaKnown RBP13.68□□□□□ -0.22
PBRM1-219ENST00000462207 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.67□□□□□ -0.22
PBRM1-219ENST00000462207 TP73O15350 636 aa13.67□□□□□ -0.22
PBRM1-219ENST00000462207 TMEM63AO94886 807 aa13.67□□□□□ -0.22
PBRM1-219ENST00000462207 SEC31AO94979 1220 aaKnown RBP13.67□□□□□ -0.22
PBRM1-219ENST00000462207 SRPRAP08240 638 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms