RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-215	ENST00000461974	GABRB2	P47870	512 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	ARSF	P54793	590 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	NANOS3	P60323	173 aa	Known RBP	4.24	□□□□□ -1.73
FN1-215	ENST00000461974	YWHAZ	P63104	245 aa	Known RBP	4.24	□□□□□ -1.73
FN1-215	ENST00000461974	CYP4A11	Q02928	519 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	FOXD4	Q12950	439 aa	Predicted RBP	4.24	□□□□□ -1.73
FN1-215	ENST00000461974	EZH2	Q15910	746 aa	Known RBP	4.24	□□□□□ -1.73
FN1-215	ENST00000461974	TST	Q16762	297 aa	Known RBP	4.24	□□□□□ -1.73
FN1-215	ENST00000461974	SYTL3	Q4VX76	610 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	FAM69A	Q5T7M9	428 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	MZT2B	Q6NZ67	158 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	SLC22A25	Q6T423	547 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	ZNF793	Q6ZN11	406 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	C4orf50	Q6ZRC1	276 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	SERPINA11	Q86U17	422 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	CCDC25	Q86WR0	208 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	ANKRD13B	Q86YJ7	626 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	DIS3L2	Q8IYB7	885 aa	Known RBP	4.24	□□□□□ -1.73
FN1-215	ENST00000461974	CCDC105	Q8IYK2	499 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	ADSSL1	Q8N142	457 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	DPP10	Q8N608	796 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	KDM1B	Q8NB78	822 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	DNAAF1	Q8NEP3	725 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	TMEM163	Q8TC26	289 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	NEK9	Q8TD19	979 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	ZNF333	Q96JL9	665 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	CRAMP1	Q96RY5	1269 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	NRIP3	Q9NQ35	241 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	NCKIPSD	Q9NZQ3	722 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	KIAA1456	Q9P272	454 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	PEMT	Q9UBM1	199 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	HSPB7	Q9UBY9	170 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	UTS2R	Q9UKP6	389 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974	BTBD3	Q9Y2F9	522 aa		4.24	□□□□□ -1.73
FN1-215	ENST00000461974		A0A096LPK6	155 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974		A0A0A0MQY5	61 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	PABPN1L	A6NDY0	278 aa	Known RBP	4.23	□□□□□ -1.73
FN1-215	ENST00000461974	PGPEP1L	A6NFU8	196 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	NPIPB15	A6NHN6	443 aa	Predicted RBP	4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TTC36	A6NLP5	189 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	FAM157A	C9JC47	383 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	UGDH	O60701	494 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	USO1	O60763	962 aa	Known RBP	4.23	□□□□□ -1.73
FN1-215	ENST00000461974	PPFIA2	O75334	1257 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	SEC14L2	O76054	403 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	CCNDBP1	O95273	360 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	CBX6	O95503	412 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TOP3B	O95985	862 aa	Known RBP	4.23	□□□□□ -1.73
FN1-215	ENST00000461974	KLKB1	P03952	638 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	PRR35	P0CG20	571 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	UBL4A	P11441	157 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	CDH2	P19022	906 aa	Predicted RBP	4.23	□□□□□ -1.73
FN1-215	ENST00000461974	KLRC2	P26717	231 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	MPG	P29372	298 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	CIITA	P33076	1130 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	CPOX	P36551	454 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	ARHGAP25	P42331	645 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	RPL7A	P62424	266 aa	Known RBP	4.23	□□□□□ -1.73
FN1-215	ENST00000461974	ME3	Q16798	604 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	SMTNL2	Q2TAL5	461 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	SUPT20HL1	Q3ZLR7	823 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	ZNF667	Q5HYK9	610 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	C6orf10	Q5SRN2	563 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	SERTAD4-AS1	Q5TG53	156 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	BRINP3	Q76B58	766 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	PIP4P1	Q86T03	277 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TADA2B	Q86TJ2	420 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TRIM74	Q86UV6	250 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TRIM73	Q86UV7	250 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	FAM160B2	Q86V87	743 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	DNAJC10	Q8IXB1	793 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	ETNPPL	Q8TBG4	499 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	METTL6	Q8TCB7	284 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	KLHL29	Q96CT2	875 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TMEM79	Q9BSE2	394 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TRMO	Q9BU70	441 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	SCNM1	Q9BWG6	230 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	QTRT1	Q9BXR0	403 aa	Known RBP	4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TTYH1	Q9H313	450 aa	Predicted RBP	4.23	□□□□□ -1.73
FN1-215	ENST00000461974	CXorf56	Q9H5V9	222 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	TBC1D22B	Q9NU19	505 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	IL1RAPL1	Q9NZN1	696 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	NLK	Q9UBE8	527 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	SEL1L	Q9UBV2	794 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	AASS	Q9UDR5	926 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	PCDHA12	Q9UN75	941 aa		4.23	□□□□□ -1.73
FN1-215	ENST00000461974	ADGRF5	Q8IZF2	1346 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	TARSL2	A2RTX5	802 aa	Known RBP	4.22	□□□□□ -1.73
FN1-215	ENST00000461974	ZNF814	B7Z6K7	855 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	MDM4	O15151	490 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	ATG13	O75143	517 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	IFNA2	P01563	188 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	IL1A	P01583	271 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	FGB	P02675	491 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	HEXA	P06865	529 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	HSPA1A	P0DMV8	641 aa	Known RBP	4.22	□□□□□ -1.73
FN1-215	ENST00000461974	HSPA1B	P0DMV9	641 aa	Known RBP	4.22	□□□□□ -1.73
FN1-215	ENST00000461974	LAMP2	P13473	410 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	FMO4	P31512	558 aa		4.22	□□□□□ -1.73
FN1-215	ENST00000461974	RYK	P34925	604 aa		4.22	□□□□□ -1.73

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