RNA–Protein interactions for RNA: ENST00000460465.5

CDK11A-209, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,333 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-209ENST00000460465 CARNMT1Q8N4J0 409 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 TTC17Q96AE7 1141 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 ZNF669Q96BR6 464 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-209ENST00000460465 SAMD11Q96NU1 681 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 PPANQ9NQ55 473 aaKnown RBP17.61■□□□□ 0.41
CDK11A-209ENST00000460465 INTS9Q9NV88 658 aaKnown RBP17.61■□□□□ 0.41
CDK11A-209ENST00000460465 YBX2Q9Y2T7 364 aaKnown RBP17.61■□□□□ 0.41
CDK11A-209ENST00000460465 TYW5A2RUC4 315 aaKnown RBP17.61■□□□□ 0.41
CDK11A-209ENST00000460465 C1RP00736 705 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 HOXA9P31269 272 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 BBS7Q8IWZ6 715 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 C4orf33Q8N1A6 199 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 ANKRD42Q8N9B4 389 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 ARRDC2Q8TBH0 407 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 ATXN2LQ8WWM7 1075 aaKnown RBP17.61■□□□□ 0.41
CDK11A-209ENST00000460465 CENPTQ96BT3 561 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 TMA16Q96EY4 203 aaKnown RBP17.61■□□□□ 0.41
CDK11A-209ENST00000460465 ACE2Q9BYF1 805 aaPredicted RBP17.61■□□□□ 0.41
CDK11A-209ENST00000460465 MUC3BQ9H195 1237 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 ZNF180Q9UJW8 692 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 SOX13Q9UN79 622 aa17.61■□□□□ 0.41
CDK11A-209ENST00000460465 H0Y626 953 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 LEFTY2O00292 366 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 MUSKO15146 869 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 SPAG7O75391 227 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 MOSPD3O75425 235 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 USP1O94782 785 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 FGF19O95750 216 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 RHOP08100 348 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 ERVK-21P61565 698 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 MPP2Q14168 576 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 IHHQ14623 411 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 TEAD2Q15562 447 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 SMAD1Q15797 465 aaKnown RBP17.6■□□□□ 0.41
CDK11A-209ENST00000460465 TMEM135Q86UB9 458 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 MGARPQ8TDB4 240 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 SMC6Q96SB8 1091 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 CHRAC1Q9NRG0 131 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 IL1RAPL1Q9NZN1 696 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 UBA2Q9UBT2 640 aaPredicted RBP17.6■□□□□ 0.41
CDK11A-209ENST00000460465 ZNF510Q9Y2H8 683 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 FAM237BA0A1B0GVD1 139 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 LUC7L3O95232 432 aaKnown RBP17.6■□□□□ 0.41
CDK11A-209ENST00000460465 FSCBQ5H9T9 825 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 PDE12Q6L8Q7 609 aaKnown RBP17.6■□□□□ 0.41
CDK11A-209ENST00000460465 RANBP10Q6VN20 620 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDK11A-209ENST00000460465 BHMTQ93088 406 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 CERS2Q96G23 380 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 POLR1EQ9GZS1 481 aaKnown RBP17.6■□□□□ 0.41
CDK11A-209ENST00000460465 CERS4Q9HA82 394 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 VPS45Q9NRW7 570 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 SLC17A6Q9P2U8 582 aa17.6■□□□□ 0.41
CDK11A-209ENST00000460465 MAGEB16A2A368 324 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 GJB3O75712 270 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 HNRNPA1P09651 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDK11A-209ENST00000460465 PBX2P40425 430 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 CHRNA4P43681 627 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 SLC5A9Q2M3M2 681 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 ANKRD20A4Q4UJ75 823 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 ZNF697Q5TEC3 545 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 MARK2Q7KZI7 788 aaKnown RBP17.59■□□□□ 0.41
CDK11A-209ENST00000460465 RBM23Q86U06 439 aaKnown RBP17.59■□□□□ 0.41
CDK11A-209ENST00000460465 RASSF3Q86WH2 238 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 CDKL2Q92772 493 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 TADA1Q96BN2 335 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 MFSD3Q96ES6 412 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 SEMA3CQ99985 751 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 RABEP2Q9H5N1 569 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 ARHGAP26Q9UNA1 814 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 FAM169AQ9Y6X4 670 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 ZCWPW2A0A1B0GU75 182 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 CBX4O00257 560 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 XYLBO75191 536 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 KRT4P19013 534 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 DDX6P26196 483 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDK11A-209ENST00000460465 NTHL1P78549 312 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 MGAT5Q09328 741 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 POU6F1Q14863 301 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 LRRC14Q15048 493 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 ZNF783Q6ZMS7 281 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 ZNF771Q7L3S4 317 aaPredicted RBP17.59■□□□□ 0.41
CDK11A-209ENST00000460465 ADGRD2Q7Z7M1 963 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 BBS5Q8N3I7 341 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 CPXM2Q8N436 756 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 TDRD5Q8NAT2 981 aaKnown RBP17.59■□□□□ 0.41
CDK11A-209ENST00000460465 WFDC5Q8TCV5 224 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 CCL26Q9Y258 94 aa17.59■□□□□ 0.41
CDK11A-209ENST00000460465 PRPF4O43172 522 aaKnown RBP eCLIP17.58■□□□□ 0.41
CDK11A-209ENST00000460465 ERVK-10P10266 1014 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 NMBRP28336 390 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 MZF1P28698 734 aaPredicted RBP17.58■□□□□ 0.41
CDK11A-209ENST00000460465 ARHGAP15Q53QZ3 475 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 PCID2Q5JVF3 399 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 CMTM8Q8IZV2 173 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 SLC25A41Q8N5S1 370 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 SH3RF2Q8TEC5 729 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 DDI1Q8WTU0 396 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 KIFC1Q9BW19 673 aa17.58■□□□□ 0.41
CDK11A-209ENST00000460465 CINPQ9BW66 212 aaPredicted RBP17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms