RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 A0A087X0M5 115 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 A0A1B0GX30 115 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 PABPN1LA6NDY0 278 aaKnown RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 CBY3A6NI87 242 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 LDLRAD4O15165 306 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 CEP104O60308 925 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 BAIAP3O94812 1187 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 KLRC2P26717 231 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 SKIV2L2P42285 1042 aaKnown RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 PAFAH1B1P43034 410 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 CPA2P48052 419 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 BLKP51451 505 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 CCR9P51686 369 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 EFNA5P52803 228 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 UFM1P61960 85 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 EFNB1P98172 346 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 ID2Q02363 134 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 SRSF1Q07955 248 aaKnown RBP eCLIP3.64□□□□□ -1.83
RFC4-211ENST00000460408 PMPCAQ10713 525 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 ME3Q16798 604 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 PIK3CD-AS1Q5SR53 167 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 TTC39AQ5SRH9 613 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 HYIQ5T013 277 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 GPATCH4Q5T3I0 446 aaKnown RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 FAM69AQ5T7M9 428 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 AAGABQ6PD74 315 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 TMED8Q6PL24 325 aaPredicted RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 KDELC2Q7Z4H8 507 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 R3HCC1LQ7Z5L2 792 aaKnown RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 PIP4P1Q86T03 277 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 CCDC25Q86WR0 208 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 OR4N2Q8NGD1 307 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 TDRD7Q8NHU6 1098 aaKnown RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 ADAMTS15Q8TE58 950 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 TMEM170AQ8WVE7 144 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 CENPIQ92674 756 aaPredicted RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 COQ8BQ96D53 544 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 WDR83Q9BRX9 315 aaKnown RBP3.64□□□□□ -1.83
RFC4-211ENST00000460408 TUBB6Q9BUF5 446 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 SLC25A18Q9H1K4 315 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 SLC32A1Q9H598 525 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 NRIP3Q9NQ35 241 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 THSD1Q9NS62 852 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 KCND2Q9NZV8 630 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 HSPB7Q9UBY9 170 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 SARDHQ9UL12 918 aa3.64□□□□□ -1.83
RFC4-211ENST00000460408 A0A1W2PPH5 198 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 DPPA5A6NC42 116 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 ZNF814B7Z6K7 855 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 ADAM10O14672 748 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 TSPAN4O14817 238 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 PRPF4O43172 522 aaKnown RBP eCLIP3.63□□□□□ -1.83
RFC4-211ENST00000460408 TGFB1I1O43294 461 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 ATG13O75143 517 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 CBX6O95503 412 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 DDX58O95786 925 aaKnown RBP3.63□□□□□ -1.83
RFC4-211ENST00000460408 UNGP13051 313 aaPredicted RBP3.63□□□□□ -1.83
RFC4-211ENST00000460408 MAN1A1P33908 653 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 SLC16A2P36021 539 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 RGS2P41220 211 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 DCAF7P61962 342 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 ZNF91Q05481 1191 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 SLC18A2Q05940 514 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 SMTNL2Q2TAL5 461 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 Q4G0T1 1027 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 ENTPD8Q5MY95 495 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 C10orf25Q5T742 122 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 TMEM268Q5VZI3 342 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 TMEM81Q6P7N7 255 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 SLC2A7Q6PXP3 512 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 ZNF793Q6ZN11 406 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 PRSS45Q7RTY3 260 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 TECPR1Q7Z6L1 1165 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 CHD1LQ86WJ1 897 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 GHDCQ8N2G8 530 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 SLC25A41Q8N5S1 370 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 KDM1BQ8NB78 822 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 MPHOSPH8Q99549 860 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 AAMDCQ9H7C9 122 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 PNRC2Q9NPJ4 139 aaKnown RBP3.63□□□□□ -1.83
RFC4-211ENST00000460408 ENTPD7Q9NQZ7 604 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 OLA1Q9NTK5 396 aaKnown RBP3.63□□□□□ -1.83
RFC4-211ENST00000460408 RNF146Q9NTX7 359 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 TAS2R10Q9NYW0 307 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 MSRB1Q9NZV6 116 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 MPP6Q9NZW5 540 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 PEMTQ9UBM1 199 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 AASSQ9UDR5 926 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.63□□□□□ -1.83
RFC4-211ENST00000460408 ITIH6Q6UXX5 1313 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 ADGRF5Q8IZF2 1346 aa3.63□□□□□ -1.83
RFC4-211ENST00000460408 A0A1W2PPC1 479 aa3.62□□□□□ -1.83
RFC4-211ENST00000460408 NPIPB15A6NHN6 443 aaPredicted RBP3.62□□□□□ -1.83
RFC4-211ENST00000460408 A6NNC1 897 aa3.62□□□□□ -1.83
RFC4-211ENST00000460408 KCNU1A8MYU2 1149 aa3.62□□□□□ -1.83
RFC4-211ENST00000460408 FAM157AC9JC47 383 aa3.62□□□□□ -1.83
RFC4-211ENST00000460408 TAF4O00268 1085 aa3.62□□□□□ -1.83
RFC4-211ENST00000460408 RNMTO43148 476 aaKnown RBP3.62□□□□□ -1.83
RFC4-211ENST00000460408 USO1O60763 962 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms