RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 OXSMQ9NWU1 459 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 SSX2IPQ9Y2D8 614 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 TTC3P53804 2025 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 TSC2P49815 1807 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 ERI2A8K979 691 aaKnown RBP18.4■□□□□ 0.54
HPS3-202ENST00000460120 SBK3P0C264 359 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 SLC1A2P43004 574 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 CDK7P50613 346 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 ZRSR2Q15696 482 aaKnown RBP18.4■□□□□ 0.54
HPS3-202ENST00000460120 DDR2Q16832 855 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 SLC39A12Q504Y0 691 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 ISLR2Q6UXK2 745 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 EGFL6Q8IUX8 553 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 ANKRD27Q96NW4 1050 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 SIKE1Q9BRV8 207 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 GLOD4Q9HC38 313 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 LRCH1Q9Y2L9 728 aa18.4■□□□□ 0.54
HPS3-202ENST00000460120 FAM95CA0A1B0GW59 222 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 A0A1W2PQH9 124 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 F8W8V4 182 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 MAFKO60675 156 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 HMBSP08397 361 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 PLK1P53350 603 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 ASPHQ12797 758 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 ZNF789Q5FWF6 425 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 PKN3Q6P5Z2 889 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 TMC7Q7Z402 723 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 SNX32Q86XE0 403 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 CENPLQ8N0S6 344 aaPredicted RBP18.39■□□□□ 0.53
HPS3-202ENST00000460120 GPR22Q99680 433 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 CSNK1G1Q9HCP0 422 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 GIT1Q9Y2X7 761 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 MAGEB16A2A368 324 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 IRAK2O43187 625 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 HNRNPLP14866 589 aaKnown RBP eCLIP18.39■□□□□ 0.536e-20■■■■■ 34.7
HPS3-202ENST00000460120 PAPOLAP51003 745 aaKnown RBP18.39■□□□□ 0.53
HPS3-202ENST00000460120 DLG1Q12959 904 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 CCNIQ14094 377 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 DBN1Q16643 649 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 LSM12Q3MHD2 195 aaKnown RBP18.39■□□□□ 0.53
HPS3-202ENST00000460120 USP13Q92995 863 aaPredicted RBP18.39■□□□□ 0.53
HPS3-202ENST00000460120 FAM136AQ96C01 138 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 PABPC5Q96DU9 382 aaKnown RBP18.39■□□□□ 0.53
HPS3-202ENST00000460120 ACBD6Q9BR61 282 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 RHOJQ9H4E5 214 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 CORO1CQ9ULV4 474 aaPredicted RBP18.39■□□□□ 0.53
HPS3-202ENST00000460120 NEU3Q9UQ49 428 aa18.39■□□□□ 0.53
HPS3-202ENST00000460120 ENO4A6NNW6 628 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 SOAT2O75908 522 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 CSE1LP55060 971 aaKnown RBP18.38■□□□□ 0.53
HPS3-202ENST00000460120 COG7P83436 770 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 PCID2Q5JVF3 399 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 SNX31Q8N9S9 440 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 PPHLN1Q8NEY8 458 aaKnown RBP18.38■□□□□ 0.53
HPS3-202ENST00000460120 RSPH1Q8WYR4 309 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 VAT1Q99536 393 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 C1orf21Q9H246 121 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 SUDS3Q9H7L9 328 aaPredicted RBP18.38■□□□□ 0.53
HPS3-202ENST00000460120 OSER1Q9NX31 292 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 PRG3Q9Y2Y8 225 aaPredicted RBP18.38■□□□□ 0.53
HPS3-202ENST00000460120 RAD54BQ9Y620 910 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 GPR182O15218 404 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 B4GALT3O60512 393 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 ARNTP27540 789 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 GRK4P32298 578 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 ETFBP38117 255 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 ARPP19P56211 112 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 RBM20Q5T481 1227 aaKnown RBP18.38■□□□□ 0.53
HPS3-202ENST00000460120 RNF220Q5VTB9 566 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 SEL1L3Q68CR1 1132 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 LRRC8EQ6NSJ5 796 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 FAM171BQ6P995 826 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 CD300LGQ6UXG3 332 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 RNF111Q6ZNA4 994 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 ISL2Q96A47 359 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 KIFC1Q9BW19 673 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 C1QTNF1Q9BXJ1 281 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 S100A14Q9HCY8 104 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 GTSE1Q9NYZ3 720 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 SORCS3Q9UPU3 1222 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 ACOT9Q9Y305 439 aa18.38■□□□□ 0.53
HPS3-202ENST00000460120 AAR2Q9Y312 384 aaKnown RBP18.38■□□□□ 0.53
HPS3-202ENST00000460120 MTF2Q9Y483 593 aaPredicted RBP18.38■□□□□ 0.53
HPS3-202ENST00000460120 BUD23O43709 281 aaKnown RBP18.37■□□□□ 0.53
HPS3-202ENST00000460120 DLX3O60479 287 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 HOXC8P31273 242 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 CCR1P32246 355 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 PKNOX1P55347 436 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 TSPY1Q01534 308 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 SATB1Q01826 763 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 CSHL1Q14406 222 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 FSCBQ5H9T9 825 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 LIPMQ5VYY2 423 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 DENND5AQ6IQ26 1287 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 CNSTQ6PJW8 725 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 SCD5Q86SK9 330 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 LINC00523Q86TU6 105 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 OR6Y1Q8NGX8 325 aa18.37■□□□□ 0.53
HPS3-202ENST00000460120 STN1Q9H668 368 aaKnown RBP18.37■□□□□ 0.53
HPS3-202ENST00000460120 NT5MQ9NPB1 228 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms