RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 AASDHPPTQ9NRN7 309 aa10.21□□□□□ -0.77
HDLBP-228ENST00000459788 PARVAQ9NVD7 372 aa10.21□□□□□ -0.77
HDLBP-228ENST00000459788 NEU3Q9UQ49 428 aa10.21□□□□□ -0.77
HDLBP-228ENST00000459788 HS3ST3A1Q9Y663 406 aa10.21□□□□□ -0.77
HDLBP-228ENST00000459788 SLCO1B1Q9Y6L6 691 aa10.21□□□□□ -0.77
HDLBP-228ENST00000459788 WASF2Q9Y6W5 498 aa10.21□□□□□ -0.77
HDLBP-228ENST00000459788 ASPMQ8IZT6 3477 aa10.21□□□□□ -0.78
HDLBP-228ENST00000459788 MYLKQ15746 1914 aa10.21□□□□□ -0.78
HDLBP-228ENST00000459788 LRRK1Q38SD2 2015 aa10.21□□□□□ -0.78
HDLBP-228ENST00000459788 DMXL2Q8TDJ6 3036 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 KPNA3O00505 521 aaPredicted RBP10.2□□□□□ -0.78
HDLBP-228ENST00000459788 SMAD6O43541 496 aaKnown RBP10.2□□□□□ -0.78
HDLBP-228ENST00000459788 KDELR3O43731 214 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 HYAL3O43820 417 aaPredicted RBP10.2□□□□□ -0.78
HDLBP-228ENST00000459788 POP4O95707 220 aaKnown RBP10.2□□□□□ -0.78
HDLBP-228ENST00000459788 APC2O95996 2303 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 WNT1P04628 370 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 CTSLP07711 333 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 MYBL1P10243 752 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 TNFAIP3P21580 790 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 RRM1P23921 792 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 NEK3P51956 506 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 TAS2R38P59533 333 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 SNRPD1P62314 119 aaKnown RBP10.2□□□□□ -0.78
HDLBP-228ENST00000459788 TPM4P67936 248 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 ILKQ13418 452 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 GRM3Q14832 879 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 ACAP1Q15027 740 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 CDO1Q16878 200 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 PLEKHA7Q6IQ23 1121 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 RWDD4Q6NW29 188 aaKnown RBP10.2□□□□□ -0.78
HDLBP-228ENST00000459788 DCUN1D2Q6PH85 259 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 DPY19L3Q6ZPD9 716 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 TMPRSS7Q7RTY8 843 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 CACTIN-AS1Q8N1I8 211 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 UMODL1-AS1Q8N2C9 162 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 HCAR2Q8TDS4 363 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 SAP25Q8TEE9 199 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 SYN2Q92777 582 aaPredicted RBP10.2□□□□□ -0.78
HDLBP-228ENST00000459788 TRIM11Q96F44 468 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 FEM1CQ96JP0 617 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 SPON2Q9BUD6 331 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 TMPRSS4Q9NRS4 437 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 DKK4Q9UBT3 224 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 MFHAS1Q9Y4C4 1052 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 SNX10Q9Y5X0 201 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 BZW2Q9Y6E2 419 aaKnown RBP10.2□□□□□ -0.78
HDLBP-228ENST00000459788 ZZEF1O43149 2961 aa10.2□□□□□ -0.78
HDLBP-228ENST00000459788 DSPP15924 2871 aaKnown RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 A0A1W2PQJ5 194 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 K7ERQ8 282 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 TOR1BO14657 336 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 CCP110O43303 1012 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 TSPAN6O43657 245 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 LEFTY1O75610 366 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 CD160O95971 181 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 HNRNPA2B1P22626 353 aaKnown RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 EPHA8P29322 1005 aaPredicted RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 AKT2P31751 481 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 CCNHP51946 323 aaPredicted RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 NDST2P52849 883 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 PPP2CBP62714 309 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 RPS21P63220 83 aaKnown RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 PPP2CAP67775 309 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 RAD51Q06609 339 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 NR1I3Q14994 352 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 IQCB1Q15051 598 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 KLHL40Q2TBA0 621 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 ZNF284Q2VY69 593 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 TMEM259Q4ZIN3 620 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 ARSIQ5FYB1 569 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 KCNT1Q5JUK3 1230 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 SFMBT2Q5VUG0 894 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 CCNI2Q6ZMN8 369 aaPredicted RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 DRC7Q8IY82 874 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 CCDC185Q8N715 623 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 DENND6BQ8NEG7 585 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 OR2AP1Q8NGE2 309 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 ARRDC3Q96B67 414 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 KLHDC7BQ96G42 594 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 CAMK1GQ96NX5 476 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 MCEEQ96PE7 176 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 LENG8Q96PV6 779 aaPredicted RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 FUCA2Q9BTY2 467 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 CPEB1Q9BZB8 566 aaKnown RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 TTYH3Q9C0H2 523 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 MRPL47Q9HD33 250 aaKnown RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 SEPT11Q9NVA2 429 aaKnown RBP10.19□□□□□ -0.78
HDLBP-228ENST00000459788 KLHL11Q9NVR0 708 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 TOR4AQ9NXH8 423 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 DKK3Q9UBP4 350 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 FTSJ1Q9UET6 329 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 FZD10Q9ULW2 581 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 SCINQ9Y6U3 715 aa10.19□□□□□ -0.78
HDLBP-228ENST00000459788 A0A1W2PQU0 124 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 LRRC53A6NM62 1247 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 FAM72CH0Y354 149 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 TEX33O43247 280 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 BNIP3LO60238 219 aa10.18□□□□□ -0.78
HDLBP-228ENST00000459788 RNF8O76064 485 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms