RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 CABS1Q96KC9 395 aa16.58■□□□□ 0.25
MBD1-210ENST00000457839 SLC25A51Q9H1U9 297 aa16.58■□□□□ 0.25
MBD1-210ENST00000457839 SSU72Q9NP77 194 aaKnown RBP16.58■□□□□ 0.25
MBD1-210ENST00000457839 DONSONQ9NYP3 566 aa16.58■□□□□ 0.25
MBD1-210ENST00000457839 GGT7Q9UJ14 662 aa16.58■□□□□ 0.25
MBD1-210ENST00000457839 SOX13Q9UN79 622 aa16.58■□□□□ 0.25
MBD1-210ENST00000457839 REV3LO60673 3130 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 HDCP19113 662 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 MAPKAPK2P49137 400 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 PGGT1BP53609 377 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 GNA12Q03113 381 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 SEPT6Q14141 434 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 LBRQ14739 615 aaKnown RBP16.58■□□□□ 0.24
MBD1-210ENST00000457839 ADGRF1Q5T601 910 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 CGB2Q6NT52 195 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 ESRP1Q6NXG1 681 aaKnown RBP16.58■□□□□ 0.24
MBD1-210ENST00000457839 KDELC1Q6UW63 502 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 KCNMB4Q86W47 210 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 PNPLA1Q8N8W4 532 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 SLC22A17Q8WUG5 538 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 PTPRN2Q92932 1015 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 ALKBH8Q96BT7 664 aaKnown RBP16.58■□□□□ 0.24
MBD1-210ENST00000457839 PLD4Q96BZ4 506 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 TCF25Q9BQ70 676 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 IARS2Q9NSE4 1012 aaKnown RBP16.58■□□□□ 0.24
MBD1-210ENST00000457839 TXNDC16Q9P2K2 825 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 INSL6Q9Y581 213 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 CEP290O15078 2479 aa16.58■□□□□ 0.24
MBD1-210ENST00000457839 ITGA2BP08514 1039 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 HOXD9P28356 352 aaPredicted RBP16.57■□□□□ 0.24
MBD1-210ENST00000457839 IRX4P78413 519 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 IL10RBQ08334 325 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 PPM1JQ5JR12 505 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 PLPP4Q5VZY2 271 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 STRA8Q7Z7C7 330 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 C7orf61Q8IZ16 206 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 ADAMTS19Q8TE59 1207 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 NSMCE1Q8WV22 266 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 EXOC2Q96KP1 924 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 MECRQ9BV79 373 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 RXFP1Q9HBX9 757 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 UXTQ9UBK9 157 aaPredicted RBP16.57■□□□□ 0.24
MBD1-210ENST00000457839 CPQQ9Y646 472 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 TPP1O14773 563 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 PRAMEF11O60813 436 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 DNAJB1P25685 340 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 YBEYP58557 167 aaPredicted RBP16.57■□□□□ 0.24
MBD1-210ENST00000457839 PPIGQ13427 754 aaKnown RBP eCLIP16.57■□□□□ 0.247e-7■■■□□ 17.1
MBD1-210ENST00000457839 PDK4Q16654 411 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 RABGAP1LQ5R372 815 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 TEDDM1Q5T9Z0 273 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 CMC1Q7Z7K0 106 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 ACVR1CQ8NER5 493 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 ARRDC2Q8TBH0 407 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 SEMA3CQ99985 751 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 PITPNM3Q9BZ71 974 aa16.57■□□□□ 0.24
MBD1-210ENST00000457839 SMG9Q9H0W8 520 aaKnown RBP16.57■□□□□ 0.24
MBD1-210ENST00000457839 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.57■□□□□ 0.24
MBD1-210ENST00000457839 HGSO14964 777 aaPredicted RBP16.56■□□□□ 0.24
MBD1-210ENST00000457839 TM9SF1O15321 606 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 PSMD3O43242 534 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 TLL1O43897 1013 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 SNX3O60493 162 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 VAPBO95292 243 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 C8AP07357 584 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 ETV4P43268 484 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 CDH4P55283 916 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 PDE1BQ01064 536 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 C5orf22Q49AR2 442 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 FSCBQ5H9T9 825 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 TEX26Q8N6G2 289 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 LRRC8CQ8TDW0 803 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 ZNF75CPQ92670 426 aaPredicted RBP16.56■□□□□ 0.24
MBD1-210ENST00000457839 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
MBD1-210ENST00000457839 KIFC1Q9BW19 673 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 IQCGQ9H095 443 aaKnown RBP16.56■□□□□ 0.24
MBD1-210ENST00000457839 ENTPD7Q9NQZ7 604 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 HCFC1R1Q9NWW0 138 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 PRRC2BQ5JSZ5 2229 aaKnown RBP16.56■□□□□ 0.24
MBD1-210ENST00000457839 PLXNA4Q9HCM2 1894 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 MYLKQ15746 1914 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 A0A1W2PRU2 124 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 CBX4O00257 560 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 CCL16O15467 120 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 PRKCGP05129 697 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 MYOGP15173 224 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 SERPINB9P50453 376 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 CNGA3Q16281 694 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 PCID2Q5JVF3 399 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 RNF187Q5TA31 235 aaPredicted RBP16.56■□□□□ 0.24
MBD1-210ENST00000457839 PKN3Q6P5Z2 889 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 UBE2Q1Q7Z7E8 422 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 HERC6Q8IVU3 1022 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 CCDC197Q8NCU1 140 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 ARMC2Q8NEN0 867 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 MTBPQ96DY7 904 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 CAB39LQ9H9S4 337 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 PDFQ9HBH1 243 aa16.56■□□□□ 0.24
MBD1-210ENST00000457839 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.55■□□□□ 0.24
MBD1-210ENST00000457839 MAGEB16A2A368 324 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms