RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	NTN3	O00634	580 aa	Predicted RBP	13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	IGLV3-25	P01717	112 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	LIPC	P11150	499 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLC2A3	P11169	496 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	EPB41	P11171	864 aa	Known RBP	13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	UGT1A5	P35504	534 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	STIM1	Q13586	685 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	TBR1	Q16650	682 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	EDRF1	Q3B7T1	1238 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	TMEM270	Q6UE05	265 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	RBM43	Q6ZSC3	357 aa	Known RBP	13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	RAB11FIP2	Q7L804	512 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLC35F3	Q8IY50	421 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	ZSCAN1	Q8NBB4	408 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	CCDC3	Q9BQI4	270 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	ZSWIM1	Q9BR11	485 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	STRADB	Q9C0K7	418 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLC25A18	Q9H1K4	315 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	SYNDIG1	Q9H7V2	258 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	GEMIN8	Q9NWZ8	242 aa	Known RBP	13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	SEPT10	Q9P0V9	454 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	SPAST	Q9UBP0	616 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	PCDHGA4	Q9Y5G9	962 aa		13.46	□□□□□ -0.25
SNHG17-208	ENST00000456953	CENPE	Q02224	2701 aa		13.46	□□□□□ -0.26
SNHG17-208	ENST00000456953	SYCE3	A1L190	88 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	LMO7DN	F2Z398	122 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	CASC3	O15234	703 aa	Known RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	RAD51B	O15315	384 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	NVL	O15381	856 aa	Known RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	TRUB2	O95900	331 aa	Known RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	PAK4	O96013	591 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	SRC	P12931	536 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	CR2	P20023	1033 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	RPL34	P49207	117 aa	Known RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	CENPC	Q03188	943 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	SRSF6	Q13247	344 aa	Known RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	SERINC3	Q13530	473 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	PDE1C	Q14123	709 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	MORC3	Q14149	939 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	FGL2	Q14314	439 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	FBXL22	Q6P050	247 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	B3GNT8	Q7Z7M8	397 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	ZSCAN30	Q86W11	494 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	ATP11C	Q8NB49	1132 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	OR52K2	Q8NGK3	314 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	PPP1R16A	Q96I34	528 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	TBATA	Q96M53	351 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	RPRD1A	Q96P16	312 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	LENG8	Q96PV6	779 aa	Predicted RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	EPB41L5	Q9HCM4	733 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	PADI4	Q9UM07	663 aa		13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	TEP1	Q99973	2627 aa	Known RBP	13.45	□□□□□ -0.26
SNHG17-208	ENST00000456953	FPGT	O14772	594 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	CETN3	O15182	167 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	CLDN11	O75508	207 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	GCAT	O75600	419 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	MT-CO1	P00395	513 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	BRD2	P25440	801 aa	Known RBP	13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	PPP1R2	P41236	205 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	ACADSB	P45954	432 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	NEK3	P51956	506 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	KRT83	P78385	493 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	EIF2B5	Q13144	721 aa	Known RBP	13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	EIF4EBP2	Q13542	120 aa	Predicted RBP	13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	PRRT3	Q5FWE3	981 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	MANEA	Q5SRI9	462 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	TCERG1L	Q5VWI1	586 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	ESRP1	Q6NXG1	681 aa	Known RBP	13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	GRIN3A	Q8TCU5	1115 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	FEM1C	Q96JP0	617 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	MUC3B	Q9H195	1237 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	POPDC2	Q9HBU9	364 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	ST7	Q9NRC1	585 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	ANO10	Q9NW15	660 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	APOBEC3B	Q9UH17	382 aa	Known RBP	13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	IL36A	Q9UHA7	158 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	DACH1	Q9UI36	760 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	TBC1D30	Q9Y2I9	924 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	PCDHB4	Q9Y5E5	795 aa		13.44	□□□□□ -0.26
SNHG17-208	ENST00000456953	CLEC18A	A5D8T8	446 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953		D6RAR5	112 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	PSMA7	O14818	248 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	SPINT1	O43278	529 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	ANXA6	P08133	673 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	JMJD7	P0C870	316 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	ADRB3	P13945	408 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	CCKBR	P32239	447 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	CCR1	P32246	355 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	CLCN6	P51797	869 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	ADK	P55263	362 aa	Known RBP	13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	YWHAZ	P63104	245 aa	Known RBP	13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	LRMP	Q12912	555 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	SGCG	Q13326	291 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	MTA1	Q13330	715 aa		13.43	□□□□□ -0.26
SNHG17-208	ENST00000456953	AUH	Q13825	339 aa	Known RBP	13.43	□□□□□ -0.26

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