RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 CELF6Q96J87 481 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-215ENST00000456545 PACSIN1Q9BY11 444 aa18.41■□□□□ 0.54
PDLIM2-215ENST00000456545 KDM4CQ9H3R0 1056 aa18.41■□□□□ 0.54
PDLIM2-215ENST00000456545 ZDHHC6Q9H6R6 413 aa18.41■□□□□ 0.54
PDLIM2-215ENST00000456545 CAPN10Q9HC96 672 aa18.41■□□□□ 0.54
PDLIM2-215ENST00000456545 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.41■□□□□ 0.54
PDLIM2-215ENST00000456545 CWC15Q9P013 229 aaKnown RBP18.41■□□□□ 0.54
PDLIM2-215ENST00000456545 NUMA1Q14980 2115 aa18.41■□□□□ 0.54
PDLIM2-215ENST00000456545 TMEM110-MUSTN1A8MSY1 372 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 DFFAO00273 331 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 KRIT1O00522 736 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 LEFTY1O75610 366 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 CTSLP07711 333 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 TMEM253P0C7T8 217 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 RARAP10276 462 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 IL1R2P27930 398 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 DRD3P35462 400 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 GJC1P36383 396 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 ZNF75DP51815 510 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 AFF3P51826 1226 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 RHOAP61586 193 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 INO80DQ53TQ3 878 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 ERMP1Q7Z2K6 904 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 TEKT4Q8WW24 435 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 SKA1Q96BD8 255 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 ZDHHC5Q9C0B5 715 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 SLC39A8Q9C0K1 460 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 NOL6Q9H6R4 1146 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 UBA2Q9UBT2 640 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 TPX2Q9ULW0 747 aaKnown RBP18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 NENFQ9UMX5 172 aa18.4■□□□□ 0.54
PDLIM2-215ENST00000456545 CDX4O14627 284 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 OPHN1O60890 802 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 ZNF821O75541 412 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 TMCC1O94876 653 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 POP4O95707 220 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 CD160O95971 181 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 IGSF6O95976 241 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 GSRP00390 522 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 TCF4P15884 667 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 CSNK1EP49674 416 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 PAPOLAP51003 745 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 CCR5P51681 352 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 MESDQ14696 234 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 DPYSL2Q16555 572 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 FBXL19Q6PCT2 694 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 ERN2Q76MJ5 926 aaKnown RBP18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 PLPP6Q8IY26 295 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 MINDY1Q8N5J2 469 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 LZTR1Q8N653 840 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 OR2AP1Q8NGE2 309 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 SLC35G2Q8TBE7 412 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 MRFAP1L1Q96HT8 127 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 GDAP1L1Q96MZ0 367 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 KLC2Q9H0B6 622 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 SP110Q9HB58 689 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 AASDHPPTQ9NRN7 309 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 ADAMTS9Q9P2N4 1935 aa18.39■□□□□ 0.53
PDLIM2-215ENST00000456545 A0A1W2PPC4 97 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 PLRG1O43660 514 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 PROSCO94903 275 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 PCDH8O95206 1070 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 IGHV4-34P06331 123 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 AMPD1P23109 780 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 CDH6P55285 790 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 C21orf59P57076 290 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 MYLK3Q32MK0 819 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 IL27RAQ6UWB1 636 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 TMCO3Q6UWJ1 677 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 CYP4V2Q6ZWL3 525 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 KCTD6Q8NC69 237 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 OR6K2Q8NGY2 324 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 ARRDC3Q96B67 414 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 LRIG1Q96JA1 1093 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 LRRC19Q9H756 370 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 TM9SF3Q9HD45 589 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 WASF2Q9Y6W5 498 aa18.38■□□□□ 0.53
PDLIM2-215ENST00000456545 A0A1B0GVT2 93 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 J3KR12 359 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 PALMO75781 387 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 MAT2AP31153 395 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 NEK3P51956 506 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 GRIK2Q13002 908 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 SPA17Q15506 151 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 SLC45A4Q5BKX6 768 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 ATXN7L2Q5T6C5 722 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 AGBL4Q5VU57 503 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 POLNQ7Z5Q5 900 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 GAS2L3Q86XJ1 694 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 MAP7D3Q8IWC1 876 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 RHOT2Q8IXI1 618 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 TC2NQ8N9U0 490 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 NETO2Q8NC67 525 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 SERAC1Q96JX3 654 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 HDAC8Q9BY41 377 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 PCDH18Q9HCL0 1135 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 PREBQ9HCU5 417 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 OSGEPQ9NPF4 335 aa18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 LUC7LQ9NQ29 371 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-215ENST00000456545 CHD5Q8TDI0 1954 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms