RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 RPS6KB2Q9UBS0 482 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PDCD5O14737 125 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RAD51CO43502 376 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZBTB11O95625 1053 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NME5P56597 212 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CYP24A1Q07973 514 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PABPC1LQ4VXU2 614 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PCID2Q5JVF3 399 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SPOUT1Q5T280 376 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 THEMIS2Q5TEJ8 643 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 LCN1P1Q5VSP4 162 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 FAM196AQ6ZSG2 479 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF572Q7Z3I7 529 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SZRD1Q7Z422 152 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PACS2Q86VP3 889 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 HERC6Q8IVU3 1022 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CASKIN2Q8WXE0 1202 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SEPT5Q99719 369 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MYNNQ9NPC7 610 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 FAM49BQ9NUQ9 324 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PCMTD2Q9NV79 361 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SMPD3Q9NY59 655 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PTPRQQ9UMZ3 2332 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GSTT2P0CG29 244 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TARSP26639 723 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NOS3P29474 1203 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MPP1Q00013 466 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 UBE3AQ05086 875 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CTDSPL2Q05D32 466 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CARTPTQ16568 116 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF827Q17R98 1081 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RPL13AP3Q6NVV1 102 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RAD9BQ6WBX8 426 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ADAT2Q7Z6V5 191 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZZZ3Q8IYH5 903 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 FBXW8Q8N3Y1 598 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 OSBP2Q969R2 916 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SMCHD1A6NHR9 2005 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SULT1B1O43704 296 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 HPGDP15428 266 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SLC6A4P31645 630 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MRPS22P82650 360 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF844Q08AG5 666 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 KCNMA1Q12791 1236 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CAMK2GQ13555 558 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TOB2Q14106 344 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CHRNA2Q15822 529 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RASAL3Q86YV0 1011 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SPATA9Q9BWV2 254 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 UNKQ9C0B0 810 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 C1orf21Q9H246 121 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 LRRC19Q9H756 370 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RNF112Q9ULX5 631 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 USP18Q9UMW8 372 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 DYRK1BQ9Y463 629 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NCANO14594 1321 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 EEF2KO00418 725 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CCNDBP1O95273 360 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GLP2RO95838 553 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CD2P06729 351 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ETS1P14921 441 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 MAGEA3P43357 314 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CD151P48509 253 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GRAPQ13588 217 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 LONRF1Q17RB8 773 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 HSD17B12Q53GQ0 312 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ANXA8L1Q5VT79 327 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 KLHDC7AQ5VTJ3 777 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GLYCTKQ8IVS8 523 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 GRAPLQ8TC17 118 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 DQX1Q8TE96 717 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 NMD3Q96D46 503 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ROGDIQ9GZN7 287 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZDHHC4Q9NPG8 344 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ANKDD1BA6NHY2 528 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SLC9A3R1O14745 358 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ENTPD3O75355 529 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TRIM3O75382 744 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PENKP01210 267 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CUL2Q13617 745 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PDIA6Q15084 440 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZNF720Q7Z2F6 126 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 WDR49Q8IV35 697 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 TOR1AIP2Q8NFQ8 470 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 DCAKDQ8WVC6 231 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PGAP3Q96FM1 320 aaPredicted RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 INTS7Q9NVH2 962 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 CD274Q9NZQ7 290 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 UBQLN1Q9UMX0 589 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 RUVBL1Q9Y265 456 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PCDHA3Q9Y5H8 950 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 A0A1B0GVC2 190 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 SMCO3A2RU48 225 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 EIF1AYO14602 144 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 PLEKHA8P1O95397 391 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 C8BP07358 591 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 YES1P07947 543 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 AGTR1P30556 359 aa5.27□□□□□ -1.57
CSMD3-204ENST00000455883 EIF1AXP47813 144 aaKnown RBP5.27□□□□□ -1.57
CSMD3-204ENST00000455883 ZBED5Q49AG3 693 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms