RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 KIR2DL1P43626 348 aaPredicted RBP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 TUBB4BP68371 445 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 MRPS25P82663 173 aaKnown RBP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 NSUN2Q08J23 767 aaKnown RBP eCLIP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 E2F5Q15329 346 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 KCTD19Q17RG1 926 aaPredicted RBP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 ITPRIPL1Q6GPH6 555 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 C22orf39Q6P5X5 142 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 KCNV2Q8TDN2 545 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 FRS2Q8WU20 508 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 TRIM51Q9BSJ1 452 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 POLR1EQ9GZS1 481 aaKnown RBP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 GBA3Q9H227 469 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 GLOD4Q9HC38 313 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 HAUS2Q9NVX0 235 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 CA14Q9ULX7 337 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 PLA2G4CQ9UP65 541 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 BHMG1C9JSJ3 638 aaPredicted RBP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 NPC1O15118 1278 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 NEBLO76041 1014 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 NNMTP40261 264 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 STARD6P59095 220 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 RHOAP61586 193 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 ENPP2Q13822 863 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 CCINQ13939 588 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 ZNF234Q14588 700 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 TRIP13Q15645 432 aaPredicted RBP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 DLG2Q15700 870 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 DGKKQ5KSL6 1271 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 EGFLAMQ63HQ2 1017 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 ZNF852Q6ZMS4 543 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 ARHGEF18Q6ZSZ5 1173 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 ZNF687Q8N1G0 1237 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 PCDH20Q8N6Y1 951 aaKnown RBP16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 ERP44Q9BS26 406 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 TMEM245Q9H330 911 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 MUTYHQ9UIF7 546 aa16.85■□□□□ 0.29
CCDC90B-202ENST00000455220 KRBA1A5PL33 1030 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 ANTXRLA6NF34 631 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 METTL18O95568 372 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 NFKB1P19838 968 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 IVDP26440 423 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 RGRP47804 291 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 CSNK1DP48730 415 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 ST8SIA6P61647 398 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 PARP6Q2NL67 630 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 FBXO43Q4G163 708 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 KLHDC8BQ8IXV7 354 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 PLPP6Q8IY26 295 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 ARRDC2Q8TBH0 407 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 SEC14L1Q92503 715 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 FCRL5Q96RD9 977 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 GORASP1Q9BQQ3 440 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 SLC25A51Q9H1U9 297 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 ASIC3Q9UHC3 531 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 RSPH14Q9UHP6 348 aa16.84■□□□□ 0.29
CCDC90B-202ENST00000455220 TTC34A8MYJ7 566 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 GSRP00390 522 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 CES1P23141 567 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 PSMB4P28070 264 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 FDFT1P37268 417 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 VPS41P49754 854 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 MAXP61244 160 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 GPS1Q13098 491 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 FNDC3BQ53EP0 1204 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 RALGPS1Q5JS13 557 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 TEX35Q5T0J7 233 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 EMC10Q5UCC4 262 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 DUPD1Q68J44 220 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 CCDC70Q6NSX1 233 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 ZNF513Q8N8E2 541 aaPredicted RBP16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 OR2AP1Q8NGE2 309 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 TADA1Q96BN2 335 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 IMP4Q96G21 291 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 SHDQ96IW2 340 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 NECAB3Q96P71 396 aaPredicted RBP16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 NUDCD1Q96RS6 583 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 RAB17Q9H0T7 212 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 DMGDHQ9UI17 866 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 FBXL21Q9UKT6 434 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 SLC8A2Q9UPR5 921 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 UTP11Q9Y3A2 253 aaKnown RBP16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 TTLL3Q9Y4R7 772 aa16.83■□□□□ 0.28
CCDC90B-202ENST00000455220 HEXIM1O94992 359 aaKnown RBP16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 CD72P21854 359 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 IL12RB1P42701 662 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 SNRPD1P62314 119 aaKnown RBP16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 SLC7A5Q01650 507 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 DSC2Q02487 901 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 NIPAL4Q0D2K0 466 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 SEMA5AQ13591 1074 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 HNRNPA1L2Q32P51 320 aaKnown RBP16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 EXOC2Q96KP1 924 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 GDAP1L1Q96MZ0 367 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 PPP1R2P1Q96PQ5 205 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 SEMA3CQ99985 751 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 TM6SF2Q9BZW4 377 aa16.82■□□□□ 0.28
CCDC90B-202ENST00000455220 ETNK1Q9HBU6 452 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms