RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TRAPPC9Q96Q05 1148 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 GAS2L1Q99501 681 aaPredicted RBP16.16■□□□□ 0.18
SNX17-204ENST00000453453 APOL5Q9BWW9 433 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 BRD8Q9H0E9 1235 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 TDP1Q9NUW8 608 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 STOML2Q9UJZ1 356 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 NEU3Q9UQ49 428 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 MTCH2Q9Y6C9 303 aa16.16■□□□□ 0.18
SNX17-204ENST00000453453 E2F8A0AVK6 867 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 NRG2O14511 850 aaPredicted RBP16.15■□□□□ 0.18
SNX17-204ENST00000453453 SKAP2O75563 359 aaPredicted RBP16.15■□□□□ 0.18
SNX17-204ENST00000453453 POU3F3P20264 500 aaPredicted RBP16.15■□□□□ 0.18
SNX17-204ENST00000453453 IGFBP4P22692 258 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 SLC6A4P31645 630 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 VHLP40337 213 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 ATAT1Q5SQI0 421 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 FYB2Q5VWT5 728 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 IZUMO3Q5VZ72 239 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 Q6ZNB5 142 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 LONP2Q86WA8 852 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 ZNF683Q8IZ20 524 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 CYP4X1Q8N118 509 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 ITFG1Q8TB96 612 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 ADAMTS19Q8TE59 1207 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 SH3RF2Q8TEC5 729 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 QKIQ96PU8 341 aaKnown RBP eCLIP16.15■□□□□ 0.189e-9■■□□□ 14.4
SNX17-204ENST00000453453 TSC22D3Q99576 134 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 TBC1D10AQ9BXI6 508 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 MMADHCQ9H3L0 296 aaPredicted RBP16.15■□□□□ 0.18
SNX17-204ENST00000453453 TMEM248Q9NWD8 314 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 MPP6Q9NZW5 540 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 NKX1-2Q9UD57 310 aaPredicted RBP16.15■□□□□ 0.18
SNX17-204ENST00000453453 LRCH1Q9Y2L9 728 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 MFHAS1Q9Y4C4 1052 aa16.15■□□□□ 0.18
SNX17-204ENST00000453453 TROVE2P10155 538 aaKnown RBP eCLIP16.14■□□□□ 0.17
SNX17-204ENST00000453453 WEE1P30291 646 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 STIP1P31948 543 aaKnown RBP16.14■□□□□ 0.17
SNX17-204ENST00000453453 MAGEA4P43358 317 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 MAPKAPK2P49137 400 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 SF3A3Q12874 501 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■■■□ 21.8
SNX17-204ENST00000453453 TMED2Q15363 201 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 C5orf22Q49AR2 442 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 FAM91A1Q658Y4 838 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 CWF19L1Q69YN2 538 aaKnown RBP16.14■□□□□ 0.17
SNX17-204ENST00000453453 RFWD3Q6PCD5 774 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 SYCE2Q6PIF2 218 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 ALLCQ8N6M5 410 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 HJURPQ8NCD3 748 aaPredicted RBP16.14■□□□□ 0.17
SNX17-204ENST00000453453 TFB1MQ8WVM0 346 aaKnown RBP16.14■□□□□ 0.17
SNX17-204ENST00000453453 USP13Q92995 863 aaPredicted RBP16.14■□□□□ 0.17
SNX17-204ENST00000453453 IGSF8Q969P0 613 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 WBP2Q969T9 261 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 RIPOR3Q96MK2 946 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 OLFM3Q96PB7 478 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 SMC6Q96SB8 1091 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 TMEM121Q9BTD3 319 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 SMG9Q9H0W8 520 aaKnown RBP16.14■□□□□ 0.17
SNX17-204ENST00000453453 CLDND1Q9NY35 253 aa16.14■□□□□ 0.17
SNX17-204ENST00000453453 CPSF2Q9P2I0 782 aaKnown RBP16.14■□□□□ 0.17
SNX17-204ENST00000453453 TRIOBPQ9H2D6 2365 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 EXOC1LA0A1B0GW35 172 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 BCLAF3A2AJT9 711 aaKnown RBP16.13■□□□□ 0.17
SNX17-204ENST00000453453 CLDN11O75508 207 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 STK10O94804 968 aaKnown RBP16.13■□□□□ 0.17
SNX17-204ENST00000453453 MAP3K6O95382 1288 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 T-ENOLP0DO92 83 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 CDH4P55283 916 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 MXRA7P84157 204 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 SLC10A2Q12908 348 aaPredicted RBP16.13■□□□□ 0.17
SNX17-204ENST00000453453 PRPF38BQ5VTL8 546 aaKnown RBP16.13■□□□□ 0.17
SNX17-204ENST00000453453 CHST9Q7L1S5 443 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 GET4Q7L5D6 327 aaPredicted RBP16.13■□□□□ 0.17
SNX17-204ENST00000453453 TFAP2DQ7Z6R9 452 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 CCNYQ8ND76 341 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 ZSCAN18Q8TBC5 510 aaPredicted RBP16.13■□□□□ 0.17
SNX17-204ENST00000453453 TRABDQ9H4I3 376 aa16.13■□□□□ 0.17
SNX17-204ENST00000453453 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.13■□□□□ 0.17
SNX17-204ENST00000453453 ZFP37Q9Y6Q3 630 aaPredicted RBP16.13■□□□□ 0.17
SNX17-204ENST00000453453 PRRC2BQ5JSZ5 2229 aaKnown RBP16.13■□□□□ 0.17
SNX17-204ENST00000453453 A0A1B0GVM2 712 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 TCAF2A6NFQ2 919 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 DFFAO00273 331 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 DNALI1O14645 258 aaPredicted RBP16.12■□□□□ 0.17
SNX17-204ENST00000453453 CNTN5O94779 1100 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 IFNB1P01574 187 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 IL1BP01584 269 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 TCF3P15923 654 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 TSHRP16473 764 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 NDST2P52849 883 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 ZXDBP98169 803 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 GALNT2Q10471 571 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 AP1B1Q10567 949 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 ALFQ53S48 1182 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 HEATR6Q6AI08 1181 aaKnown RBP16.12■□□□□ 0.17
SNX17-204ENST00000453453 LRRC49Q8IUZ0 686 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 ARID3BQ8IVW6 561 aaPredicted RBP16.12■□□□□ 0.17
SNX17-204ENST00000453453 FAM217AQ8IXS0 508 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 UMODL1-AS1Q8N2C9 162 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 GALNT15Q8N3T1 639 aa16.12■□□□□ 0.17
SNX17-204ENST00000453453 CPXM2Q8N436 756 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms