RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 UHMK1Q8TAS1 419 aaKnown RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 PYROXD1Q8WU10 500 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 SMARCD2Q92925 531 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 BHMTQ93088 406 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 ARL8AQ96BM9 186 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 OTUB2Q96DC9 234 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 LRRC39Q96DD0 335 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 PABPC5Q96DU9 382 aaKnown RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 ASIC4Q96FT7 647 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 MSLNLQ96KJ4 702 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 MRGPRX2Q96LB1 330 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 TTC25Q96NG3 672 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 PSKH2Q96QS6 385 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 MYADMQ96S97 322 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 EBNA1BP2Q99848 306 aaKnown RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 MGME1Q9BQP7 344 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 TMBIM4Q9HC24 238 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 XAB2Q9HCS7 855 aaKnown RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 ATP13A1Q9HD20 1204 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 SPHK2Q9NRA0 654 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 OBP2AQ9NY56 170 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 GDE1Q9NZC3 331 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 UBP1Q9NZI7 540 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 KIAA1522Q9P206 1035 aaPredicted RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 UBA2Q9UBT2 640 aaPredicted RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 VPS51Q9UID3 782 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 FBXO10Q9UK96 956 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 COLQQ9Y215 455 aaPredicted RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 AAR2Q9Y312 384 aaKnown RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 WNT6Q9Y6F9 365 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.1□□□□□ -1.43
SDC4P-201ENST00000453285 F5P12259 2224 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 ANKRD12Q6UB98 2062 aa6.1□□□□□ -1.43
SDC4P-201ENST00000453285 CXorf51AA0A1B0GTR3 108 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 LOC285095A0A1B0GVY8 99 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 TYW5A2RUC4 315 aaKnown RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 SDR42E2A6NKP2 422 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 HEPACAM2A8MVW5 462 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CBX4O00257 560 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 SOX1O00570 391 aaPredicted RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 SLC9A3R1O14745 358 aaPredicted RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 TCEA3O75764 348 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 MT-CO1P00395 513 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 AGTP01019 485 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CYBBP04839 570 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CYP17A1P05093 508 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CISD3P0C7P0 127 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 TYRP14679 529 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 MGAT1P26572 445 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 GCAP28676 217 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 HLA-FP30511 346 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CD86P42081 329 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 NPY2RP49146 381 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 LMAN1P49257 510 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 EIF3BP55884 814 aaKnown RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 WNT3AP56704 352 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 FAM193AP78312 1265 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 SARNPP82979 210 aaKnown RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 MPP3Q13368 585 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 SLC12A1Q13621 1099 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CDH18Q13634 790 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 DHCR24Q15392 516 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 SLC14A2Q15849 920 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 PLEKHG6Q3KR16 790 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 INO80DQ53TQ3 878 aaPredicted RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 TTMPQ5BVD1 217 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 DNAJC21Q5F1R6 531 aaKnown RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 TNFAIP8L3Q5GJ75 292 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 ATAT1Q5SQI0 421 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CEP85LQ5SZL2 805 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 CERCAMQ5T4B2 595 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 STEAP4Q687X5 459 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 TRIM68Q6AZZ1 485 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 TANGO2Q6ICL3 276 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 NAPEPLDQ6IQ20 393 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 LINGO4Q6UY18 593 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 C3orf62Q6ZUJ4 267 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 GET4Q7L5D6 327 aaPredicted RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 DCAF4L2Q8NA75 395 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 BPIFB1Q8TDL5 484 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 NSMCE1Q8WV22 266 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 OSCP1Q8WVF1 389 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 ACDQ96AP0 544 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 VOPP1Q96AW1 172 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 PPP1R2P1Q96PQ5 205 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 SEMA3CQ99985 751 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 APOL2Q9BQE5 337 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 FAM83CQ9BQN1 747 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 TRIM56Q9BRZ2 755 aaKnown RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 BBS2Q9BXC9 721 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 PLA2G2FQ9BZM2 168 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 ROPN1BQ9BZX4 212 aaPredicted RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 MUC3BQ9H195 1237 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 ACBD3Q9H3P7 528 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 LRRC40Q9H9A6 602 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 ROPN1Q9HAT0 212 aaPredicted RBP6.09□□□□□ -1.43
SDC4P-201ENST00000453285 ARNT2Q9HBZ2 717 aa6.09□□□□□ -1.43
SDC4P-201ENST00000453285 VPS45Q9NRW7 570 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms