RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 SPASTQ9UBP0 616 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 GULP1Q9UBP9 304 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 RGS17Q9UGC6 210 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 BAIAP2L1Q9UHR4 511 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 ATP6V1HQ9UI12 483 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 LEF1Q9UJU2 399 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 TLK1Q9UKI8 766 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 PSME2Q9UL46 239 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 CDH7Q9ULB5 785 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 NENFQ9UMX5 172 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 SNX6Q9UNH7 406 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 TNFSF13BQ9Y275 285 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 SNX14Q9Y5W7 946 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 NFS1Q9Y697 457 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC4A4Q9Y6R1 1079 aa4.56□□□□□ -1.68
HMGB3P21-201ENST00000452483 CENPJQ9HC77 1338 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TEX13CA0A0J9YWL9 993 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 XKRY2A2RUG3 117 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 OR2A25A4D2G3 310 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NCF1BA6NI72 391 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NCF1CA8MVU1 366 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TO15178 435 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZSCAN9O15535 394 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NUAK1O60285 661 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 PRAMEF4O60810 478 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 RECQL4O94761 1208 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 LARGE1O95461 756 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 PTBP3O95758 552 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 DDAH2O95865 285 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 FUCA1P04066 466 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 AMY1AP04745 511 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CYBBP04839 570 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CFIP05156 583 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 COX7A2P14406 83 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 GALP22466 123 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TCEA1P23193 301 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 GLRA2P23416 452 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 DNAJB1P25685 340 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC5A2P31639 672 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CHRNA3P32297 505 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SOAT1P35610 550 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 MDH1P40925 334 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 MAPKAPK2P49137 400 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CDR1P51861 262 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 VCPP55072 806 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SNU13P55769 128 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 ACY1Q03154 408 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SPAG1Q07617 926 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 GPM6BQ13491 265 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 ATP1A4Q13733 1029 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 GALNT3Q14435 633 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NEDD9Q14511 834 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NRN1LQ496H8 165 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 FILIP1LQ4L180 1135 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC9B1Q4ZJI4 515 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 KCNT1Q5JUK3 1230 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 RIPPLY2Q5TAB7 128 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 MROH9Q5TGP6 573 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 METTL11BQ5VVY1 283 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 STEAP3Q658P3 488 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 KLC3Q6P597 504 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 ZC3H14Q6PJT7 736 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 PAQR3Q6TCH7 311 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 AFTPHQ6ULP2 937 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TMC5Q6UXY8 1006 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC36A4Q6YBV0 504 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 B3GNT6Q6ZMB0 384 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TAS2R42Q7RTR8 314 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CABP7Q86V35 215 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 P3H2Q8IVL5 708 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 KDM8Q8N371 416 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 FSTL5Q8N475 847 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 MINDY1Q8N5J2 469 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 PI4KAP1Q8N8J0 262 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NIPA2Q8N8Q9 360 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 KDM1BQ8NB78 822 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NHLRC2Q8NBF2 726 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 XXYLT1Q8NBI6 393 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CAMKVQ8NCB2 501 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 DHX58Q96C10 678 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 KLHL29Q96CT2 875 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 HDAC11Q96DB2 347 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 EDC3Q96F86 508 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 ERO1AQ96HE7 468 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 PGAM5Q96HS1 289 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 WRNIP1Q96S55 665 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 INTS14Q96SY0 518 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 PRRX2Q99811 253 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TUBA1CQ9BQE3 449 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CCDC77Q9BR77 488 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NUP85Q9BW27 656 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 STRA6Q9BX79 667 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 CPEB1Q9BZB8 566 aaKnown RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 TINAGL1Q9GZM7 467 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SLC25A32Q9H2D1 315 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 DENND2DQ9H6A0 471 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 NRDE2Q9H7Z3 1164 aa4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 BARX1Q9HBU1 254 aaPredicted RBP4.55□□□□□ -1.68
HMGB3P21-201ENST00000452483 SYTL2Q9HCH5 934 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms