RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 USH1CQ9Y6N9 552 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 ERI2A8K979 691 aaKnown RBP10.91□□□□□ -0.66
PKP4-206ENST00000452162 MSI1O43347 362 aaKnown RBP10.91□□□□□ -0.66
PKP4-206ENST00000452162 PAGE1O75459 146 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 ATF6P18850 670 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 HTR7P34969 479 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 SDHAF4Q5VUM1 108 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 ITPRIPL1Q6GPH6 555 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 ZNF449Q6P9G9 518 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 PACS1Q6VY07 963 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 ARHGAP12Q8IWW6 846 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 KLHDC8BQ8IXV7 354 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 STKLD1Q8NE28 680 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 GPR152Q8TDT2 470 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 CELF6Q96J87 481 aaKnown RBP10.91□□□□□ -0.66
PKP4-206ENST00000452162 TEKT5Q96M29 485 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 NECAB3Q96P71 396 aaPredicted RBP10.91□□□□□ -0.66
PKP4-206ENST00000452162 TSGA13Q96PP4 275 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 SLC17A6Q9P2U8 582 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 HSFX1Q9UBD0 423 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 SFMBT1Q9UHJ3 866 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 FAM50BQ9Y247 325 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 BDP1A6H8Y1 2624 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 DENND4CQ5VZ89 1909 aa10.91□□□□□ -0.66
PKP4-206ENST00000452162 A0A1W2PQH9 124 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 XYLBO75191 536 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 IL1BP01584 269 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 NFKB1P19838 968 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 CCR1P32246 355 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 ALDH1A3P47895 512 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 TUFMP49411 452 aaKnown RBP10.9□□□□□ -0.66
PKP4-206ENST00000452162 COG7P83436 770 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 SLC20A2Q08357 652 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 FRG1Q14331 258 aaKnown RBP10.9□□□□□ -0.66
PKP4-206ENST00000452162 PPP2R5DQ14738 602 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 DDR2Q16832 855 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 SPANXN3Q5MJ09 141 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 MROH9Q5TGP6 573 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 SCN4BQ8IWT1 228 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 ZNF398Q8TD17 642 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 GIPC2Q8TF65 315 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 FUBP3Q96I24 572 aaKnown RBP eCLIP10.9□□□□□ -0.66
PKP4-206ENST00000452162 NECTIN4Q96NY8 510 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 AGAP3Q96P47 875 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 ECT2Q9H8V3 914 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 OSER1Q9NX31 292 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 SCML2Q9UQR0 700 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 CHKBQ9Y259 395 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 KCNU1A8MYU2 1149 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 KLF11O14901 512 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 FGF10O15520 208 aaPredicted RBP10.9□□□□□ -0.66
PKP4-206ENST00000452162 CACNG3O60359 315 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 USP12O75317 370 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 POU2F2P09086 479 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 BGNP21810 368 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 HNRNPH1P31943 449 aaKnown RBP10.9□□□□□ -0.66
PKP4-206ENST00000452162 CRHR1P34998 444 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 FYB2Q5VWT5 728 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 RWDD4Q6NW29 188 aaKnown RBP10.9□□□□□ -0.66
PKP4-206ENST00000452162 MSANTD2Q6P1R3 559 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 CDKL2Q92772 493 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 C8orf48Q96LL4 319 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 FCRL3Q96P31 734 aaPredicted RBP10.9□□□□□ -0.66
PKP4-206ENST00000452162 CORO1BQ9BR76 489 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 PHF7Q9BWX1 381 aaPredicted RBP10.9□□□□□ -0.66
PKP4-206ENST00000452162 TSSK1BQ9BXA7 367 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 IQCGQ9H095 443 aaKnown RBP10.9□□□□□ -0.66
PKP4-206ENST00000452162 SIK2Q9H0K1 926 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 PCMTD2Q9NV79 361 aa10.9□□□□□ -0.66
PKP4-206ENST00000452162 SHROOM3Q8TF72 1996 aa10.9□□□□□ -0.67
PKP4-206ENST00000452162 CFAP73A6NFT4 308 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 NRG2O14511 850 aaPredicted RBP10.89□□□□□ -0.67
PKP4-206ENST00000452162 JCHAINP01591 159 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 POLBP06746 335 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 RHOP08100 348 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 PTPN2P17706 415 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 EPHB3P54753 998 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 NRG1Q02297 640 aaPredicted RBP10.89□□□□□ -0.67
PKP4-206ENST00000452162 ARHGAP36Q6ZRI8 547 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 TMEM135Q86UB9 458 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 NDUFAF2Q8N183 169 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 CNTD1Q8N815 330 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 TBC1D31Q96DN5 1066 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 FCRL2Q96LA5 508 aaPredicted RBP10.89□□□□□ -0.67
PKP4-206ENST00000452162 ZNF512Q96ME7 567 aaPredicted RBP10.89□□□□□ -0.67
PKP4-206ENST00000452162 SLC13A1Q9BZW2 595 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 MYLK2Q9H1R3 596 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 LRRC40Q9H9A6 602 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 NPHS2Q9NP85 383 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 VANGL2Q9ULK5 521 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 PSAT1Q9Y617 370 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 OBSL1O75147 1896 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 CUL9Q8IWT3 2517 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 ARHGAP42A6NI28 874 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 ALDOAP04075 364 aaKnown RBP10.89□□□□□ -0.67
PKP4-206ENST00000452162 TROVE2P10155 538 aaKnown RBP eCLIP10.89□□□□□ -0.67
PKP4-206ENST00000452162 CCNB1P14635 433 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 CCNCP24863 283 aa10.89□□□□□ -0.67
PKP4-206ENST00000452162 SKIV2L2P42285 1042 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms