RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 INTS5Q6P9B9 1019 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 CYP2R1Q6VVX0 501 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 LINC00299Q6ZSB3 139 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 ENOSF1Q7L5Y1 443 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 GTF2IRD2Q86UP8 949 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 MFSD4AQ8N468 514 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 C1orf216Q8TAB5 229 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 AGR3Q8TD06 166 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 ACMSDQ8TDX5 336 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 TMEM174Q8WUU8 243 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 DEPDC1BQ8WUY9 529 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 RASSF5Q8WWW0 418 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 CRYGNQ8WXF5 182 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 FAF2Q96CS3 445 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 PGBD4Q96DM1 585 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 VMP1Q96GC9 406 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 NPAS2Q99743 824 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 HSD17B14Q9BPX1 270 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 YTHDF1Q9BYJ9 559 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 B3GNT4Q9C0J1 378 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 LHPPQ9H008 270 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 CLPBQ9H078 707 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 WDR55Q9H6Y2 383 aaPredicted RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 TMEM8AQ9HCN3 771 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 TUFT1Q9NNX1 390 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 AASDHPPTQ9NRN7 309 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 SNTG2Q9NY99 539 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 PKD2L1Q9P0L9 805 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 KIAA1257Q9ULG3 409 aa8.74□□□□□ -1.01
LSM5-208ENST00000450169 COL5A3P25940 1745 aaPredicted RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 DDX60LQ5H9U9 1706 aaKnown RBP8.74□□□□□ -1.01
LSM5-208ENST00000450169 LOC102724428A0A0B4J2F2 783 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 GOLGA8IPA6NC78 632 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 TMEM191CA6NGB0 347 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 FAM159BA6NKW6 160 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 C3orf70A6NLC5 250 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 GOLGA8JA6NMD2 632 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 MAN1A2O60476 641 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 BCAS1O75363 584 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 NADKO95544 446 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 KRT8P05787 483 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 M6PRP20645 277 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 EEF1B2P24534 225 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 CNTFP26441 200 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CCND2P30279 289 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CASP3P42574 277 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 SIK1P57059 783 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 GTF2IP78347 998 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CTAG1AP78358 180 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 PPIL2Q13356 520 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 AP3B2Q13367 1082 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 AQP6Q13520 282 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 STILQ15468 1287 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 VPS72Q15906 364 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CCDC14Q49A88 953 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 AASDHQ4L235 1098 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 RSBN1Q5VWQ0 802 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 TRMT10BQ6PF06 316 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 BRICD5Q6PL45 260 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 UNC5AQ6ZN44 842 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 BBS12Q6ZW61 710 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 ERMP1Q7Z2K6 904 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 PHF13Q86YI8 300 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 EPHX4Q8IUS5 362 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 ANKRD13AQ8IZ07 590 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CNTD1Q8N815 330 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 TDRD5Q8NAT2 981 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 LPGAT1Q92604 370 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 HTRA1Q92743 480 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 MARK4Q96L34 752 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 PDZD7Q9H5P4 517 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 RPAP3Q9H6T3 665 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 RUBCNLQ9H714 662 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 C12orf10Q9HB07 376 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 RNF19AQ9NV58 838 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.73□□□□□ -1.01
LSM5-208ENST00000450169 KCND2Q9NZV8 630 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 IFT80Q9P2H3 777 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 DCDC2Q9UHG0 476 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 NOD1Q9Y239 953 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 SPEF1Q9Y4P9 236 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 RNF103-CHMP3A0A140T963 221 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 TOR1BO14657 336 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 TPP1O14773 563 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 GAS7O60861 476 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 ZBTB7AO95365 584 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 ALDOAP04075 364 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 NTRK1P04629 796 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 MSL3P1P0C860 447 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 GARTP22102 1010 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 GPD2P43304 727 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 CRKLP46109 303 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 PSMD8P48556 350 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 SLC26A2P50443 739 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 ZNF135P52742 658 aaPredicted RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 PLA2G16P53816 162 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 EIF6P56537 245 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 PSME3P61289 254 aa8.73□□□□□ -1.01
LSM5-208ENST00000450169 TRAP1Q12931 704 aaKnown RBP8.73□□□□□ -1.01
LSM5-208ENST00000450169 SLC13A2Q13183 592 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms