RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 RHOAP61586 193 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 ZNF235Q14590 738 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 LBRQ14739 615 aaKnown RBP11.79□□□□□ -0.52
LINC00408-201ENST00000447784 NOMO1Q15155 1222 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 DLG2Q15700 870 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 LAIR1Q6GTX8 287 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 ARHGAP36Q6ZRI8 547 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 RASSF3Q86WH2 238 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 TP53INP2Q8IXH6 220 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 SH2D3CQ8N5H7 860 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 GPR161Q8N6U8 529 aaKnown RBP11.79□□□□□ -0.52
LINC00408-201ENST00000447784 TXNDC5Q8NBS9 432 aaKnown RBP11.79□□□□□ -0.52
LINC00408-201ENST00000447784 TSTD1Q8NFU3 115 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 KIF18AQ8NI77 898 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 ACTRT1Q8TDG2 376 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 COG1Q8WTW3 980 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 GAB3Q8WWW8 586 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 CAPZA3Q96KX2 299 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 MRGPRX3Q96LB0 322 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 HHIPQ96QV1 700 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 ACOX2Q99424 681 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 LGMNQ99538 433 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 HERPUD2Q9BSE4 406 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 CEP44Q9C0F1 390 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 POLMQ9NP87 494 aaPredicted RBP11.79□□□□□ -0.52
LINC00408-201ENST00000447784 ZDHHC4Q9NPG8 344 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 POLR3BQ9NW08 1133 aaPredicted RBP11.79□□□□□ -0.52
LINC00408-201ENST00000447784 SEPT10Q9P0V9 454 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 NCDNQ9UBB6 729 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 RNF14Q9UBS8 474 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 CACNA1IQ9P0X4 2223 aa11.79□□□□□ -0.52
LINC00408-201ENST00000447784 USP34Q70CQ2 3546 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 VPS13AQ96RL7 3174 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 EDDM13A0A1B0GTR0 161 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 TCRBV7S2A1N4TA0A589 114 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 TARSL2A2RTX5 802 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 ANTXRLA6NF34 631 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 TTC34A8MYJ7 566 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 SGK1O00141 431 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 KRIT1O00522 736 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 ATP9BO43861 1147 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 RNASEH1O60930 286 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 RPP40O75818 363 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 ALDH1A2O94788 518 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 TMCC1O94876 653 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 RETP07949 1114 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 RBP3P10745 1247 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 CCNB1P14635 433 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 HOXB2P14652 356 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 HSPA9P38646 679 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 IL12RB1P42701 662 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 MMP13P45452 471 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 PXNP49023 591 aaPredicted RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 PPIDQ08752 370 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 ITKQ08881 620 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 SRSF5Q13243 272 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 KLF1Q13351 362 aaPredicted RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 HNRNPDQ14103 355 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 HNRNPA1L2Q32P51 320 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 SLC45A4Q5BKX6 768 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 CEP68Q76N32 757 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 DSG4Q86SJ6 1040 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 RASGEF1CQ8N431 466 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 PCDH20Q8N6Y1 951 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 FATE1Q969F0 183 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 ISG20Q96AZ6 181 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 MS4A14Q96JA4 679 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 OLFM3Q96PB7 478 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 QKIQ96PU8 341 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 GABRG3Q99928 467 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 FAM118BQ9BPY3 351 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 TMEM245Q9H330 911 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 PDFQ9HBH1 243 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 RBM22Q9NW64 420 aaKnown RBP eCLIP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 GMEB2Q9UKD1 530 aa11.78□□□□□ -0.52
LINC00408-201ENST00000447784 TTC7AQ9ULT0 858 aaPredicted RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
LINC00408-201ENST00000447784 MYO15AQ9UKN7 3530 aa11.77□□□□□ -0.52
LINC00408-201ENST00000447784 CFAP69A5D8W1 941 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 ESPNB1AK53 854 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 WASH3PC4AMC7 463 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 KCNK1O00180 336 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 ZNF185O15231 689 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 LRP3O75074 770 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 ADAM23O75077 832 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 URI1O94763 535 aaPredicted RBP11.77□□□□□ -0.53
LINC00408-201ENST00000447784 IGSF6O95976 241 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 JCHAINP01591 159 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 HLA-EP13747 358 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 PRKCHP24723 683 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 SNRPD1P62314 119 aaKnown RBP11.77□□□□□ -0.53
LINC00408-201ENST00000447784 RAD51Q06609 339 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 SLC10A7Q0GE19 358 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 SNX1Q13596 522 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 BYSLQ13895 437 aaKnown RBP11.77□□□□□ -0.53
LINC00408-201ENST00000447784 PRKD1Q15139 912 aaPredicted RBP11.77□□□□□ -0.53
LINC00408-201ENST00000447784 CYTH1Q15438 398 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 CCNG2Q16589 344 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 CARD16Q5EG05 197 aa11.77□□□□□ -0.53
LINC00408-201ENST00000447784 DNTTIP2Q5QJE6 756 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms