RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 GREB1Q4ZG55 1949 aa16.52■□□□□ 0.24
OTUB1-204ENST00000447683 ZNF195O14628 629 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 SYN3O14994 580 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 ENO1P06733 434 aaKnown RBP16.52■□□□□ 0.23
OTUB1-204ENST00000447683 SLC2A3P11169 496 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 GPR15P49685 360 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 RABGAP1LQ5R372 815 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 TMPRSS6Q8IU80 811 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 TNS4Q8IZW8 715 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.52■□□□□ 0.23
OTUB1-204ENST00000447683 EZH1Q92800 747 aaPredicted RBP16.52■□□□□ 0.23
OTUB1-204ENST00000447683 FATE1Q969F0 183 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 GLT1D1Q96MS3 346 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 NUDCD1Q96RS6 583 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 PRDM5Q9NQX1 630 aaPredicted RBP16.52■□□□□ 0.23
OTUB1-204ENST00000447683 PNPOQ9NVS9 261 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 DNAJB4Q9UDY4 337 aa16.52■□□□□ 0.23
OTUB1-204ENST00000447683 MOXD2PA6NHM9 499 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 B2RBV5 119 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 GOLGA8TH3BQL2 631 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 ENTPD5O75356 428 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 AOC1P19801 751 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 GABRB3P28472 473 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 ARCN1P48444 511 aaKnown RBP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 ALDH18A1P54886 795 aaKnown RBP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 SP3Q02447 781 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 LAMB3Q13751 1172 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 VARS2Q5ST30 1063 aaKnown RBP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 RANBP10Q6VN20 620 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 UMODL1-AS1Q8N2C9 162 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 CFAP61Q8NHU2 1237 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 TTC8Q8TAM2 541 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 NSMCE1Q8WV22 266 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 MCUR1Q96AQ8 359 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 MRGPRX2Q96LB1 330 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 C1QTNF1Q9BXJ1 281 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 NMRAL1Q9HBL8 299 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 IPO11Q9UI26 975 aaKnown RBP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 PRG3Q9Y2Y8 225 aaPredicted RBP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 TCAF1Q9Y4C2 921 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 PCDHB5Q9Y5E4 795 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 FAM92AA1XBS5 289 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 PRR5-ARHGAP8B1AHC4 643 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 DIAPH2O60879 1101 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 SIN3BO75182 1162 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 SMNDC1O75940 238 aaKnown RBP eCLIP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 PEX11BO96011 259 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 LMNAP02545 664 aaKnown RBP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 APOA4P06727 396 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 MYL4P12829 197 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 DNAJB1P25685 340 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 ARNTP27540 789 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 NDST2P52849 883 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 TBX4P57082 545 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 USP46P62068 366 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 ARHGAP8P85298 464 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 MRPL58Q14197 206 aaKnown RBP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 POU6F1Q14863 301 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 UGP2Q16851 508 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 ARMC3Q5W041 872 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 LCA5Q86VQ0 697 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 SLC43A3Q8NBI5 491 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 PPHLN1Q8NEY8 458 aaKnown RBP16.51■□□□□ 0.23
OTUB1-204ENST00000447683 ANKRD27Q96NW4 1050 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 PLEKHG4BQ96PX9 1271 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 MID2Q9UJV3 735 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 SLC39A10Q9ULF5 831 aa16.51■□□□□ 0.23
OTUB1-204ENST00000447683 CCDC78A2IDD5 438 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 TMEM114B3SHH9 223 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 MAGEC1O60732 1142 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 AHSGP02765 367 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 RHOQP17081 205 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 GRK4P32298 578 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 CPA2P48052 419 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 POLD2P49005 469 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 IDH3AP50213 366 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 RAP1GDS1P52306 607 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 ESRP1Q6NXG1 681 aaKnown RBP16.5■□□□□ 0.23
OTUB1-204ENST00000447683 FAM81AQ8TBF8 368 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 MIPOL1Q8TD10 442 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 DCLRE1BQ9H816 532 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 TREX1Q9NSU2 369 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 GMIPQ9P107 970 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 APOBEC2Q9Y235 224 aaKnown RBP16.5■□□□□ 0.23
OTUB1-204ENST00000447683 SPECC1L-ADORA2AF8WAN1 911 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 TRIM13O60858 407 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 H2AFYO75367 372 aaKnown RBP16.5■□□□□ 0.23
OTUB1-204ENST00000447683 TADA2AO75478 443 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 LUC7L3O95232 432 aaKnown RBP16.5■□□□□ 0.23
OTUB1-204ENST00000447683 COL6A1P12109 1028 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 HNRNPDQ14103 355 aaKnown RBP16.5■□□□□ 0.23
OTUB1-204ENST00000447683 KDELC1Q6UW63 502 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 NAPRTQ6XQN6 538 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 ARHGAP24Q8N264 748 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 TMEM151AQ8N4L1 468 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 RBM15BQ8NDT2 890 aaKnown RBP16.5■□□□□ 0.23
OTUB1-204ENST00000447683 RDH11Q8TC12 318 aa16.5■□□□□ 0.23
OTUB1-204ENST00000447683 FAM193BQ96PV7 902 aaPredicted RBP16.5■□□□□ 0.23
OTUB1-204ENST00000447683 TSEN34Q9BSV6 310 aaKnown RBP16.5■□□□□ 0.23
OTUB1-204ENST00000447683 SLC25A51Q9H1U9 297 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms