RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 KIF9Q9HAQ2 790 aa25.28■■□□□ 1.64
RFFL-206ENST00000447669 FCF1Q9Y324 198 aaKnown RBP25.28■■□□□ 1.64
RFFL-206ENST00000447669 TPH1P17752 444 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 SSTR1P30872 391 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 VITQ6UXI7 678 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 ARRDC2Q8TBH0 407 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 RPL10LQ96L21 214 aaKnown RBP25.27■■□□□ 1.64
RFFL-206ENST00000447669 SEMA3CQ99985 751 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 TSPYL1Q9H0U9 437 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 VIPAS39Q9H9C1 493 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 EIF2B3Q9NR50 452 aaKnown RBP25.27■■□□□ 1.64
RFFL-206ENST00000447669 KIAA1522Q9P206 1035 aaPredicted RBP25.27■■□□□ 1.64
RFFL-206ENST00000447669 SMAPO00193 183 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 ATP8B1O43520 1251 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 ZNF189O75820 626 aaPredicted RBP25.27■■□□□ 1.64
RFFL-206ENST00000447669 MAGEA3P43357 314 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 GPX6P59796 221 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 PRPSAP1Q14558 356 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 PLEKHG6Q3KR16 790 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 PARM1Q6UWI2 310 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 ZNF783Q6ZMS7 281 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 TRMT10CQ7L0Y3 403 aaKnown RBP25.27■■□□□ 1.64
RFFL-206ENST00000447669 C12orf40Q86WS4 652 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 CCDC117Q8IWD4 279 aaPredicted RBP25.27■■□□□ 1.64
RFFL-206ENST00000447669 PYROXD1Q8WU10 500 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 FGF14Q92915 247 aa25.27■■□□□ 1.64
RFFL-206ENST00000447669 SMAD6O43541 496 aaKnown RBP25.26■■□□□ 1.63
RFFL-206ENST00000447669 MGAT1P26572 445 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 IFNAR2P48551 515 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 MESP2Q0VG99 397 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 FUT11Q495W5 492 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 RELL1Q8IUW5 271 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 IMP4Q96G21 291 aaKnown RBP25.26■■□□□ 1.63
RFFL-206ENST00000447669 SLC25A51Q9H1U9 297 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 ZFP14Q9HCL3 533 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 TEX264Q9Y6I9 313 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 MIA3Q5JRA6 1907 aa25.26■■□□□ 1.63
RFFL-206ENST00000447669 A0A1W2PPC1 479 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 TMCC1O94876 653 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 LRRC8BQ6P9F7 803 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 PPP1R21Q6ZMI0 780 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 Q7L0L9 218 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 MRGPRX2Q96LB1 330 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 SIGLEC10Q96LC7 697 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 FICDQ9BVA6 458 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 CINPQ9BW66 212 aaPredicted RBP25.25■■□□□ 1.63
RFFL-206ENST00000447669 SLC9A3R1O14745 358 aaPredicted RBP25.25■■□□□ 1.63
RFFL-206ENST00000447669 CHRNA4P43681 627 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 STK19P49842 368 aaPredicted RBP25.25■■□□□ 1.63
RFFL-206ENST00000447669 PITRM1Q5JRX3 1037 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 DCAF4L2Q8NA75 395 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 OTUB2Q96DC9 234 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 ZNF599Q96NL3 588 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 VPS37BQ9H9H4 285 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 MAD1L1Q9Y6D9 718 aa25.25■■□□□ 1.63
RFFL-206ENST00000447669 KIF26AQ9ULI4 1882 aaPredicted RBP25.24■■□□□ 1.63
RFFL-206ENST00000447669 BPTFQ12830 3046 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 SUN1O94901 812 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 LAMP2P13473 410 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 SCNN1BP51168 640 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 CDK16Q00536 496 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 CERCAMQ5T4B2 595 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 NAIF1Q69YI7 327 aaPredicted RBP25.24■■□□□ 1.63
RFFL-206ENST00000447669 DNAAF3Q8N9W5 541 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 CFAP36Q96G28 342 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 TRPV4Q9HBA0 871 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 PLAC1Q9HBJ0 212 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 SMIM23A6NLE4 172 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 WNT3AP56704 352 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 ZNF844Q08AG5 666 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 ALS2CLQ60I27 953 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 TMEM215Q68D42 235 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 KDELC1Q6UW63 502 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 SMRP1Q8NCR6 262 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 RIPOR3Q96MK2 946 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 POLR1EQ9GZS1 481 aaKnown RBP25.24■■□□□ 1.63
RFFL-206ENST00000447669 NOD2Q9HC29 1040 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 SYBUQ9NX95 663 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 SEPT3Q9UH03 358 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 GGA2Q9UJY4 613 aa25.24■■□□□ 1.63
RFFL-206ENST00000447669 AAR2Q9Y312 384 aaKnown RBP25.24■■□□□ 1.63
RFFL-206ENST00000447669 H3BQF6 201 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 ANXA9O76027 345 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 ADH5P11766 374 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 POU3F3P20264 500 aaPredicted RBP25.23■■□□□ 1.63
RFFL-206ENST00000447669 SARNPP82979 210 aaKnown RBP25.23■■□□□ 1.63
RFFL-206ENST00000447669 SKOR1P84550 965 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 SMAD1Q15797 465 aaKnown RBP25.23■■□□□ 1.63
RFFL-206ENST00000447669 CEP85LQ5SZL2 805 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 ATXN7L2Q5T6C5 722 aaPredicted RBP25.23■■□□□ 1.63
RFFL-206ENST00000447669 SLC25A41Q8N5S1 370 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 SORCS1Q8WY21 1168 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 PSKH2Q96QS6 385 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 TBL1YQ9BQ87 522 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 FAM83CQ9BQN1 747 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 MGME1Q9BQP7 344 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 C2orf49Q9BVC5 232 aaPredicted RBP25.23■■□□□ 1.63
RFFL-206ENST00000447669 LRRC40Q9H9A6 602 aa25.23■■□□□ 1.63
RFFL-206ENST00000447669 XAB2Q9HCS7 855 aaKnown RBP25.23■■□□□ 1.63
RFFL-206ENST00000447669 HPS4Q9NQG7 708 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms