RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CFAP69A5D8W1 941 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 F5H423 210 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 CCDC188H7C350 402 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 GJB3O75712 270 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 NEBLO76041 1014 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 IFNB1P01574 187 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 VASPP50552 380 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 RENBPP51606 427 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 MAXP61244 160 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 MRPS21P82921 87 aaKnown RBP18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 LRRC32Q14392 662 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 GSTA5Q7RTV2 222 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 CCDC105Q8IYK2 499 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 GLIS1Q8NBF1 620 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 TXNDC5Q8NBS9 432 aaKnown RBP18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 PJA1Q8NG27 643 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 CCDC110Q8TBZ0 833 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 CASKIN2Q8WXE0 1202 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 KRT12Q99456 494 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 CARD6Q9BX69 1037 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 MFSD1Q9H3U5 465 aa18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 KLHL8Q9P2G9 620 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC4-203ENST00000447216 CXorf51AA0A1B0GTR3 108 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZBTB24O43167 697 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 MTSS1O43312 755 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 ZSCAN5DPP0CG00 497 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 NTSR1P30989 418 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 CHRNA3P32297 505 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 FNTAP49354 379 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 MRPS25P82663 173 aaKnown RBP18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 ITKQ08881 620 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 TEX44Q53QW1 395 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 BBS5Q8N3I7 341 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 TAB3Q8N5C8 712 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 KDM1BQ8NB78 822 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 OR6K2Q8NGY2 324 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 ATL2Q8NHH9 583 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 NELL2Q99435 816 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 CEP44Q9C0F1 390 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 RRAGDQ9NQL2 400 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 ATP8A1Q9Y2Q0 1164 aa18.27■□□□□ 0.52
TRAPPC4-203ENST00000447216 TMEM221A6NGB7 291 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 M0R296 226 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 INSIG1O15503 277 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 ADAM23O75077 832 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 SIN3BO75182 1162 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 STK10O94804 968 aaKnown RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 EPHX1P07099 455 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 DCNP07585 359 aaKnown RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 ALADP13716 330 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 CD68P34810 354 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 DSC2Q02487 901 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 ENPP2Q13822 863 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 TRIP13Q15645 432 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 HNRNPA1L2Q32P51 320 aaKnown RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 ANKRD20A2Q5SQ80 823 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 ANKRD20A1Q5TYW2 823 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 ANKRD20A3Q5VUR7 823 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 CWF19L1Q69YN2 538 aaKnown RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 PID1Q7Z2X4 250 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 RYBPQ8N488 228 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 PCDH20Q8N6Y1 951 aaKnown RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 CHST14Q8NCH0 376 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 KCNV2Q8TDN2 545 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 PTPRN2Q92932 1015 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 ISG20Q96AZ6 181 aaKnown RBP18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 RTP4Q96DX8 246 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 TEKT5Q96M29 485 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 PSKH2Q96QS6 385 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 FERMT1Q9BQL6 677 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 L2HGDHQ9H9P8 463 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 GLOD4Q9HC38 313 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 AMACRQ9UHK6 382 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 SLC8A2Q9UPR5 921 aa18.26■□□□□ 0.51
TRAPPC4-203ENST00000447216 EDDM13A0A1B0GTR0 161 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 C5orf60A6NFR6 353 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 IGSF6O95976 241 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 NFKB1P19838 968 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 COL9A1P20849 921 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 STIP1P31948 543 aaKnown RBP18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 GKP32189 559 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 PTGIRP43119 386 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 NIPAL4Q0D2K0 466 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 GAS6Q14393 721 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 E2F5Q15329 346 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 CARD16Q5EG05 197 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 C9orf64Q5T6V5 341 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 SDE2Q6IQ49 451 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 KIAA1211LQ6NV74 962 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 TRMT11Q7Z4G4 463 aaKnown RBP18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 METTL3Q86U44 580 aaKnown RBP18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 STK40Q8N2I9 435 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 CCDC89Q8N998 374 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 LRRN4CLQ8ND94 238 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 MNS1Q8NEH6 495 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 NSMCE3Q96MG7 304 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 GDAP1L1Q96MZ0 367 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 SPATA13Q96N96 652 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 SEMA3CQ99985 751 aa18.25■□□□□ 0.51
TRAPPC4-203ENST00000447216 MGME1Q9BQP7 344 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms