RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 EPHB6O15197 1021 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 ERVK-10P10266 1014 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 ATP5F1P24539 256 aaPredicted RBP18.84■□□□□ 0.61
SHANK3-203ENST00000445220 RARRES1P49788 294 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 PMF1Q6P1K2 205 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 GALNT18Q6P9A2 607 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 AP3S1Q92572 193 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 NT5MQ9NPB1 228 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 CLN6Q9NWW5 311 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 TAS2R14Q9NYV8 317 aa18.84■□□□□ 0.61
SHANK3-203ENST00000445220 GRIA4P48058 902 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 FKBP1CQ5VVH2 108 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 EIF3MQ7L2H7 374 aaKnown RBP18.83■□□□□ 0.61
SHANK3-203ENST00000445220 B3GALT6Q96L58 329 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 NMUR2Q9GZQ4 415 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 MAN1C1Q9NR34 630 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 ERGIC3Q9Y282 383 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 FSCN2O14926 492 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 GSTM5P46439 218 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 CXCL9Q07325 125 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 TDRD10Q5VZ19 366 aaKnown RBP18.83■□□□□ 0.61
SHANK3-203ENST00000445220 THOC7Q6I9Y2 204 aaKnown RBP18.83■□□□□ 0.61
SHANK3-203ENST00000445220 CRTC3Q6UUV7 619 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 PIWIL4Q7Z3Z4 852 aaKnown RBP18.83■□□□□ 0.61
SHANK3-203ENST00000445220 CAMKK1Q8N5S9 505 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 VGLL2Q8N8G2 317 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 COLEC11Q9BWP8 271 aa18.83■□□□□ 0.61
SHANK3-203ENST00000445220 LOC110117498-PIK3R3F6TDL0 507 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 FYNP06241 537 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 ITGAVP06756 1048 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 RPL22P35268 128 aaKnown RBP18.83■□□□□ 0.6
SHANK3-203ENST00000445220 BST2Q10589 180 aaKnown RBP18.83■□□□□ 0.6
SHANK3-203ENST00000445220 CNPY1Q3B7I2 92 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 ZDHHC17Q8IUH5 632 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 YAF2Q8IY57 180 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 LNX1Q8TBB1 728 aaPredicted RBP18.83■□□□□ 0.6
SHANK3-203ENST00000445220 Q96MT0 163 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 DYRK1BQ9Y463 629 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 CDK9P50750 372 aaKnown RBP18.83■□□□□ 0.6
SHANK3-203ENST00000445220 PSMD4P55036 377 aaKnown RBP18.83■□□□□ 0.6
SHANK3-203ENST00000445220 RTP1P59025 263 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 BICRALQ6AI39 1079 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 DNAJB14Q8TBM8 379 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 RPS6KA6Q9UK32 745 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 SH3BP1Q9Y3L3 701 aa18.83■□□□□ 0.6
SHANK3-203ENST00000445220 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-203ENST00000445220 IFNGR2P38484 337 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 HIRAP54198 1017 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-203ENST00000445220 FCGRTP55899 365 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 ZNF177Q13360 481 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-203ENST00000445220 CBWD6Q4V339 395 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 CBWD3Q5JTY5 395 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 CBWD5Q5RIA9 395 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 DDI2Q5TDH0 399 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 STARD8Q92502 1023 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 PIGUQ9H490 435 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 PCDH12Q9NPG4 1184 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 TRPC4Q9UBN4 977 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 EPN2O95208 641 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 AMPD1P23109 780 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 EIF4BP23588 611 aaKnown RBP18.82■□□□□ 0.6
SHANK3-203ENST00000445220 ERAP2Q6P179 960 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 RAB43Q86YS6 212 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 OFCC1Q8IZS5 231 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 HGH1Q9BTY7 390 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 DSEQ9UL01 958 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 WDR37Q9Y2I8 494 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 A0A1W2PPM1 405 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 F8VP50 259 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 TFECO14948 347 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-203ENST00000445220 PBX1P40424 430 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 AMHR2Q16671 573 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 C15orf52Q6ZUT6 534 aaKnown RBP18.82■□□□□ 0.6
SHANK3-203ENST00000445220 AHI1Q8N157 1196 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 RDH11Q8TC12 318 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 VAT1Q99536 393 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 CST1P01037 141 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 CYP3A4P08684 503 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 PCNAP12004 261 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 CCR1P32246 355 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 MTX3Q5HYI7 312 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 MAP1SQ66K74 1059 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-203ENST00000445220 PLET1Q6UQ28 207 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 OTOP1Q7RTM1 612 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 DPF3Q92784 378 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 ITFG2Q969R8 447 aa18.82■□□□□ 0.6
SHANK3-203ENST00000445220 GPC6Q9Y625 555 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-203ENST00000445220 DDNO94850 711 aaPredicted RBP18.81■□□□□ 0.6
SHANK3-203ENST00000445220 LTFP02788 710 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 HOXA10P31260 410 aaPredicted RBP18.81■□□□□ 0.6
SHANK3-203ENST00000445220 CAMK2GQ13555 558 aaPredicted RBP18.81■□□□□ 0.6
SHANK3-203ENST00000445220 LRRC55Q6ZSA7 311 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 ZNF621Q6ZSS3 439 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 GBA2Q9HCG7 927 aaPredicted RBP18.81■□□□□ 0.6
SHANK3-203ENST00000445220 COMMD9Q9P000 198 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 AGPSO00116 658 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 DDX53Q86TM3 631 aaKnown RBP18.81■□□□□ 0.6
SHANK3-203ENST00000445220 TBC1D21Q8IYX1 336 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 GRPEL2Q8TAA5 225 aa18.81■□□□□ 0.6
SHANK3-203ENST00000445220 MLPHQ9BV36 600 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms