RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-208	ENST00000444677	HEPH	Q9BQS7	1158 aa		13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	GTPBP2	Q9BX10	602 aa	Known RBP	13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	CEP44	Q9C0F1	390 aa		13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	UVRAG	Q9P2Y5	699 aa		13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	HECA	Q9UBI9	543 aa	Predicted RBP	13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	IL36A	Q9UHA7	158 aa		13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	FZD4	Q9ULV1	537 aa		13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	HPCAL4	Q9UM19	191 aa		13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	TFR2	Q9UP52	801 aa		13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.78	□□□□□ -0.2
GARNL3-208	ENST00000444677	TBC1D3D	A0A087WVF3	549 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3I	A0A087WXS9	549 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3E	A0A087X179	549 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3K	A0A087X1G2	549 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3F	A6NER0	549 aa	Predicted RBP	13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3L	B9A6J9	549 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	C1QTNF3-AMACR	E9PGA6	284 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TM4SF5	O14894	197 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	WNT9A	O14904	365 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	INSIG1	O15503	277 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	FOXD2	O60548	495 aa	Predicted RBP	13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TMCC1	O94876	653 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3H	P0C7X1	549 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	SDHB	P21912	280 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	IL4R	P24394	825 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	HTR7	P34969	479 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	HOXD12	P35452	270 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	RECQL	P46063	649 aa	Predicted RBP	13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	HCAR3	P49019	387 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	CSNK1E	P49674	416 aa	Known RBP	13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	ARSE	P51690	589 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TAS2R38	P59533	333 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	SFSWAP	Q12872	951 aa	Known RBP	13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	MESD	Q14696	234 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	UAP1L1	Q3KQV9	507 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	PARP15	Q460N3	678 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	PIP5KL1	Q5T9C9	394 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3G	Q6DHY5	549 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3C	Q6IPX1	549 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TBC1D3	Q8IZP1	549 aa	Predicted RBP	13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	RYBP	Q8N488	228 aa	Predicted RBP	13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	CEP76	Q8TAP6	659 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TEKT4	Q8WW24	435 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	CCDC114	Q96M63	670 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	CSPG4P5	Q96PW8	444 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	PCED1A	Q9H1Q7	454 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	ZDHHC6	Q9H6R6	413 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	PDF	Q9HBH1	243 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	TM9SF3	Q9HD45	589 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	KLHL11	Q9NVR0	708 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	LHX3	Q9UBR4	397 aa		13.77	□□□□□ -0.21
GARNL3-208	ENST00000444677	ADAMTS9	Q9P2N4	1935 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677		A0A1B0GTW7	788 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677		A0A1B0GVT2	93 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	LRRC72	A6NJI9	287 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	EIF3CL	B5ME19	914 aa	Known RBP	13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677		H3BRJ5	948 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	DFFA	O00273	331 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	ARHGAP33	O14559	1287 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	BCAT2	O15382	392 aa	Predicted RBP	13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	PLRG1	O43660	514 aa	Known RBP	13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	PRAMEF11	O60813	436 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	PRNP	P04156	253 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	KCNA4	P22459	653 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	CD27	P26842	260 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	MAT2A	P31153	395 aa	Known RBP	13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	DPP6	P42658	865 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	NDST2	P52849	883 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	LIMK1	P53667	647 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	CDH6	P55285	790 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	MYLK3	Q32MK0	819 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	OR2AP1	Q8NGE2	309 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	TSC1	Q92574	1164 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	KLK6	Q92876	244 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	ISG20	Q96AZ6	181 aa	Known RBP	13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	EXOC2	Q96KP1	924 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	SLC6A18	Q96N87	628 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	EIF3C	Q99613	913 aa	Known RBP	13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	RTKN	Q9BST9	563 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	TMEM9B	Q9NQ34	198 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	SUSD2	Q9UGT4	822 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	HYOU1	Q9Y4L1	999 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	CKAP5	Q14008	2032 aa		13.76	□□□□□ -0.21
GARNL3-208	ENST00000444677	CACNA1A	O00555	2505 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677		A0A1W2PPC4	97 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	ARHGAP42	A6NI28	874 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	KRIT1	O00522	736 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	KCNK3	O14649	394 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	GSR	P00390	522 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	WNT1	P04628	370 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	GNS	P15586	552 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	ARL4A	P40617	200 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	MAGEA1	P43355	309 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	RGR	P47804	291 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	RHOA	P61586	193 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	GRIK2	Q13002	908 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	KRT81	Q14533	505 aa		13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	HADH	Q16836	314 aa	Known RBP	13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	ERN2	Q76MJ5	926 aa	Known RBP	13.75	□□□□□ -0.21
GARNL3-208	ENST00000444677	PARS2	Q7L3T8	475 aa	Known RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms