RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 ACACAQ13085 2346 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 TMEM191CA6NGB0 347 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 K7ERQ8 282 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 PLK4O00444 970 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 MCF2LO15068 1137 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 RAMP2O60895 175 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 RNF8O76064 485 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 MT-CO1P00395 513 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 TPM1P09493 284 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 ATXN1LP0C7T5 689 aaKnown RBP14.3□□□□□ -0.12
TREX1-202ENST00000444177 L1CAMP32004 1257 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 ACVRL1P37023 503 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 ETFBP38117 255 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 CCT8P50990 548 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 FAM46CQ5VWP2 391 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 RETSATQ6NUM9 610 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 C22orf39Q6P5X5 142 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 NLRP14Q86W24 1093 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 ZNF354CQ86Y25 554 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 FAM131CQ96AQ9 280 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 SKA1Q96BD8 255 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 MRFAP1L1Q96HT8 127 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 CCDC114Q96M63 670 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 TRIM5Q9C035 493 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 THAP2Q9H0W7 228 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 AASDHPPTQ9NRN7 309 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 TOR4AQ9NXH8 423 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 ARHGAP20Q9P2F6 1191 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 PCSK1NQ9UHG2 260 aa14.3□□□□□ -0.12
TREX1-202ENST00000444177 TPX2Q9ULW0 747 aaKnown RBP14.3□□□□□ -0.12
TREX1-202ENST00000444177 APC2O95996 2303 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 CACNA1GO43497 2377 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 A0A087X0T9 212 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 A0A1B0GTQ1 180 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 A0A1W2PR77 199 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 C1QTNF3-AMACRE9PGA6 284 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 ALOX15BO15296 676 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 SLC7A4O43246 635 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 LATO43561 262 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 FAM228BP0C875 321 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 CD38P28907 300 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 GRK6P43250 576 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 SERPINH1P50454 418 aaKnown RBP14.29□□□□□ -0.12
TREX1-202ENST00000444177 CLCN6P51797 869 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 TPI1P60174 286 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 ARF5P84085 180 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 POM121L1PQ3SYA9 428 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 CCNI2Q6ZMN8 369 aaPredicted RBP14.29□□□□□ -0.12
TREX1-202ENST00000444177 RTL3Q8N8U3 475 aaKnown RBP14.29□□□□□ -0.12
TREX1-202ENST00000444177 PIP4K2CQ8TBX8 421 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 FNIP1Q8TF40 1166 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 ZCCHC14Q8WYQ9 949 aaKnown RBP14.29□□□□□ -0.12
TREX1-202ENST00000444177 SERAC1Q96JX3 654 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 ELF4Q99607 663 aaPredicted RBP14.29□□□□□ -0.12
TREX1-202ENST00000444177 SNRNP25Q9BV90 132 aaKnown RBP14.29□□□□□ -0.12
TREX1-202ENST00000444177 TNKS2Q9H2K2 1166 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 KDM4CQ9H3R0 1056 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 DEF6Q9H4E7 631 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 DHX35Q9H5Z1 703 aaKnown RBP14.29□□□□□ -0.12
TREX1-202ENST00000444177 CATSPERBQ9H7T0 1116 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 AP4E1Q9UPM8 1137 aa14.29□□□□□ -0.12
TREX1-202ENST00000444177 SRRM3A6NNA2 597 aaPredicted RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 SMAD6O43541 496 aaKnown RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 TNFSF14O43557 240 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 PLRG1O43660 514 aaKnown RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 PRPSAP2O60256 369 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 LRCH4O75427 683 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 DKK1O94907 266 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 MIPP30301 263 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 RECQLP46063 649 aaPredicted RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 PPP2CBP62714 309 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 PPP2CAP67775 309 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 IL9RQ01113 521 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 CNTN1Q12860 1018 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 POLD3Q15054 466 aaPredicted RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 ALKBH5Q6P6C2 394 aaKnown RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 PRPF39Q86UA1 669 aaKnown RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 ZFHX4Q86UP3 3567 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 ARHGEF2Q92974 986 aaKnown RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 PEBP4Q96S96 227 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 MAGEH1Q9H213 219 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 RETREG1Q9H6L5 497 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 ZNHIT6Q9NWK9 470 aaKnown RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 HPCAL4Q9UM19 191 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 FCF1Q9Y324 198 aaKnown RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
TREX1-202ENST00000444177 ACTL7AQ9Y615 435 aa14.28□□□□□ -0.12
TREX1-202ENST00000444177 TMEM131Q92545 1883 aa14.27□□□□□ -0.12
TREX1-202ENST00000444177 GOLGA8CPA6NN73 597 aa14.27□□□□□ -0.13
TREX1-202ENST00000444177 TLR4O00206 839 aa14.27□□□□□ -0.13
TREX1-202ENST00000444177 EEF2KO00418 725 aaKnown RBP14.27□□□□□ -0.13
TREX1-202ENST00000444177 FGF10O15520 208 aaPredicted RBP14.27□□□□□ -0.13
TREX1-202ENST00000444177 MFAP3LO75121 409 aa14.27□□□□□ -0.13
TREX1-202ENST00000444177 ZMPSTE24O75844 475 aa14.27□□□□□ -0.13
TREX1-202ENST00000444177 CAPNS1P04632 268 aa14.27□□□□□ -0.13
TREX1-202ENST00000444177 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.13
TREX1-202ENST00000444177 CHRNA3P32297 505 aa14.27□□□□□ -0.13
TREX1-202ENST00000444177 EIF4A3P38919 411 aaKnown RBP14.27□□□□□ -0.13
TREX1-202ENST00000444177 DNA2P51530 1060 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms