RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 GDF9O60383 454 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 KRT7P08729 469 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 RARAP10276 462 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 ENGP17813 658 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 SERPINB6P35237 376 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 GRIA4P48058 902 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 NUMBP49757 651 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 AFF3P51826 1226 aaKnown RBP12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 CCNHP51946 323 aaPredicted RBP12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 FOXK2Q01167 660 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 DPYSQ14117 519 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 GRM3Q14832 879 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 AFMIDQ63HM1 303 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 TCEAL6Q6IPX3 200 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 NCEH1Q6PIU2 408 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 IL27RAQ6UWB1 636 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 DPY19L3Q6ZPD9 716 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 POLNQ7Z5Q5 900 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 OR2AP1Q8NGE2 309 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 OR14C36Q8NHC7 312 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 RFFLQ8WZ73 363 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 TCEAL3Q969E4 200 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 HMCESQ96FZ2 354 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 GDAP1L1Q96MZ0 367 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 PANX2Q96RD6 677 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 PREBQ9HCU5 417 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 SERGEFQ9UGK8 458 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 EIF2B4Q9UI10 523 aaKnown RBP12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 MFHAS1Q9Y4C4 1052 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 WASF2Q9Y6W5 498 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 DMXL1Q9Y485 3027 aa12.77□□□□□ -0.37
CDCA4P3-201ENST00000442572 A0A1W2PPC4 97 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 KPNA3O00505 521 aaPredicted RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 TM4SF5O14894 197 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 LATO43561 262 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 PRAMEF11O60813 436 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 TMCC1O94876 653 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 LCA5LO95447 670 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 POP4O95707 220 aaKnown RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 IGSF6O95976 241 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 IGHV4-34P06331 123 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 CTSLP07711 333 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 ITGB7P26010 798 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 CYLC1P35663 651 aaPredicted RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 ATXN3P54252 364 aaPredicted RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 HADHBP55084 474 aaKnown RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 RACK1P63244 317 aaKnown RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 CNTN1Q12860 1018 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 RFTN1Q14699 578 aaPredicted RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 PDK2Q15119 407 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 TEAD4Q15561 434 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 ARSIQ5FYB1 569 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 KCNT1Q5JUK3 1230 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 AGBL4Q5VU57 503 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 TRIM69Q86WT6 500 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 VSIG1Q86XK7 387 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 ZNF354CQ86Y25 554 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 LRRC49Q8IUZ0 686 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 MAP7D3Q8IWC1 876 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 CHST14Q8NCH0 376 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 TSC1Q92574 1164 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 HSPH1Q92598 858 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 RAB7BQ96AH8 199 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 SKA1Q96BD8 255 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 PACSIN1Q9BY11 444 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 KLC2Q9H0B6 622 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 MIR1-1HGQ9H1L0 117 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 TNKS2Q9H2K2 1166 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 PDFQ9HBH1 243 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 PCDH18Q9HCL0 1135 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 SPTLC3Q9NUV7 552 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 UBA2Q9UBT2 640 aaPredicted RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 DMTF1Q9Y222 760 aa12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 FCF1Q9Y324 198 aaKnown RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 ATXN2Q99700 1313 aaKnown RBP12.76□□□□□ -0.37
CDCA4P3-201ENST00000442572 TBC1D3DA0A087WVF3 549 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 TBC1D3IA0A087WXS9 549 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 TBC1D3EA0A087X179 549 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 TBC1D3KA0A087X1G2 549 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 TBC1D3FA6NER0 549 aaPredicted RBP12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 UPK3BL1B0FP48 263 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 ZNF487B1APH4 448 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 TBC1D3LB9A6J9 549 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 UPK3BL2E5RIL1 263 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 CDX4O14627 284 aaPredicted RBP12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 AP1G1O43747 822 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 RNGTTO60942 597 aaKnown RBP12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 LEFTY1O75610 366 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 FSBPO95073 299 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 TBC1D3HP0C7X1 549 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 FECHP22830 423 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 MAOBP27338 520 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 CSNK1DP48730 415 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 DNA2P51530 1060 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 SUOXP51687 545 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 NEK3P51956 506 aa12.75□□□□□ -0.37
CDCA4P3-201ENST00000442572 CDH6P55285 790 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms