RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SLC39A10Q9ULF5 831 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 B4GALT5O43286 388 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 GOT1P17174 413 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 PMS2P3Q13401 168 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 GJC2Q5T442 439 aaPredicted RBP20.57■□□□□ 0.88
SHOX2-203ENST00000441443 NCBP2-AS2Q69YL0 99 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 TMEM26Q6ZUK4 368 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 SULF1Q8IWU6 871 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 TFAP2CQ92754 450 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 PPP1R10Q96QC0 940 aaKnown RBP20.57■□□□□ 0.88
SHOX2-203ENST00000441443 PDZD7Q9H5P4 517 aa20.57■□□□□ 0.88
SHOX2-203ENST00000441443 MDM4O15151 490 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 PHGDHO43175 533 aaKnown RBP20.56■□□□□ 0.88
SHOX2-203ENST00000441443 PFKMP08237 780 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 VDRP11473 427 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 HOXD12P35452 270 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 AVPR1AP37288 418 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 BCAP31P51572 246 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 NDST1P52848 882 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 PRKCQQ04759 706 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 DOCK1Q14185 1865 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 HERC3Q15034 1050 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 SURF1Q15526 300 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 DGKDQ16760 1214 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 PITRM1Q5JRX3 1037 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 AARS2Q5JTZ9 985 aaKnown RBP20.56■□□□□ 0.88
SHOX2-203ENST00000441443 LIPMQ5VYY2 423 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 FAM160B1Q5W0V3 765 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 EEF1DP3Q658K8 133 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 CCNYL1Q8N7R7 359 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 SMOXQ9NWM0 555 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 SUCOQ9UBS9 1254 aaKnown RBP20.56■□□□□ 0.88
SHOX2-203ENST00000441443 CCDC78A2IDD5 438 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 NRP1O14786 923 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 SBK3P0C264 359 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 IDO1P14902 403 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 PRKAA1Q13131 559 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 OLFML1Q6UWY5 402 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 LSMEM2Q8N112 164 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 KHSRPQ92945 711 aaKnown RBP eCLIP20.56■□□□□ 0.88
SHOX2-203ENST00000441443 KCTD15Q96SI1 283 aaPredicted RBP20.56■□□□□ 0.88
SHOX2-203ENST00000441443 TBCBQ99426 244 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 GPATCH1Q9BRR8 931 aaKnown RBP20.56■□□□□ 0.88
SHOX2-203ENST00000441443 AP4E1Q9UPM8 1137 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 RLFQ13129 1914 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 TMEM247A6NEH6 219 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 PROZP22891 400 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 CLCN3P51790 818 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 CD300CQ08708 224 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 LAMTOR4Q0VGL1 99 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 LRRC8EQ6NSJ5 796 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 CCNYQ8ND76 341 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 MFSD3Q96ES6 412 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 NEURL2Q9BR09 285 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 CORO1BQ9BR76 489 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 NPLQ9BXD5 320 aaPredicted RBP20.56■□□□□ 0.88
SHOX2-203ENST00000441443 TRPC7Q9HCX4 862 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 SNX9Q9Y5X1 595 aa20.56■□□□□ 0.88
SHOX2-203ENST00000441443 SSC5DA1L4H1 1573 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 FAM149AA5PLN7 773 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 SLC22A2O15244 555 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 SPATA6LQ8N4H0 392 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 P2RY11Q96G91 374 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 SLC39A3Q9BRY0 314 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 TXNRD2Q9NNW7 524 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 CCDC167Q9P0B6 97 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 IPO11Q9UI26 975 aaKnown RBP20.55■□□□□ 0.88
SHOX2-203ENST00000441443 HEATR9A2RTY3 570 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 MPOP05164 745 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 SLC7A1P30825 629 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 NR2C2P49116 596 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 Q3C1V9 767 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 CBR4Q8N4T8 237 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 CCDC185Q8N715 623 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 CANT1Q8WVQ1 401 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 ISL2Q96A47 359 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 TRIP11Q15643 1979 aa20.55■□□□□ 0.88
SHOX2-203ENST00000441443 B4GALT4O60513 344 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 H2AFYO75367 372 aaKnown RBP20.54■□□□□ 0.88
SHOX2-203ENST00000441443 GOLGA7BQ2TAP0 167 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 FAM219BQ5XKK7 198 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 RWDD4Q6NW29 188 aaKnown RBP20.54■□□□□ 0.88
SHOX2-203ENST00000441443 SLC15A3Q8IY34 581 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.54■□□□□ 0.88
SHOX2-203ENST00000441443 CLEC4CQ8WTT0 213 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 KCNN1Q92952 543 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 DCPSQ96C86 337 aaKnown RBP20.54■□□□□ 0.88
SHOX2-203ENST00000441443 SPATA33Q96N06 139 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 OMDQ99983 421 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 NAT9Q9BTE0 207 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 ADAM28Q9UKQ2 775 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 MFSD11O43934 449 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 TPST1O60507 370 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 ADSLP30566 484 aaPredicted RBP20.54■□□□□ 0.88
SHOX2-203ENST00000441443 DPYSL2Q16555 572 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 SPANXN3Q5MJ09 141 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 ZYG11AQ6WRX3 759 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 CHST15Q7LFX5 561 aaPredicted RBP20.54■□□□□ 0.88
SHOX2-203ENST00000441443 TMEM151AQ8N4L1 468 aa20.54■□□□□ 0.88
SHOX2-203ENST00000441443 SLX1AQ9BQ83 275 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms