RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 HDCP19113 662 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 GRIA2P42262 883 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 DPP6P42658 865 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 NPY2RP49146 381 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 CYLC2Q14093 348 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 FLOT2Q14254 428 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 GK3PQ14409 553 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 LSMEM2Q8N112 164 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 NTAN1Q96AB6 310 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 ELMO2Q96JJ3 720 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 SLC9A7Q96T83 725 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 GPR22Q99680 433 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 RTKNQ9BST9 563 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 DRC3Q9H069 523 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 COPS7BQ9H9Q2 264 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 CNGB3Q9NQW8 809 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 RAP2CQ9Y3L5 183 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 RGSL1A5PLK6 1076 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 THRAP10827 490 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 UQCRBP14927 111 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 BRCC3P46736 316 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 ALDH1A3P47895 512 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 FOLH1Q04609 750 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 PRPSAP1Q14558 356 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 ZNF789Q5FWF6 425 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 NAPEPLDQ6IQ20 393 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 ZYG11AQ6WRX3 759 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 BHLHA9Q7RTU4 235 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 GALNT4Q8N4A0 578 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 KYQ8NBH2 561 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 MYLPFQ96A32 169 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 TMLHEQ9NVH6 421 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 GTSE1Q9NYZ3 720 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 MPP6Q9NZW5 540 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 TRHDEQ9UKU6 1024 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 ACOT9Q9Y305 439 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 F8W810 466 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 NCAM2O15394 837 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 OR6B1O95007 311 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 AXLP30530 894 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 GSTT1P30711 240 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 CDC42EP1Q00587 391 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 CACNB2Q08289 660 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 CEACAM7Q14002 265 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 TIGD5Q53EQ6 642 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 SH2D4BQ5SQS7 431 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 ZNF470Q6ECI4 717 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 LRRC8EQ6NSJ5 796 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 LDB1Q86U70 411 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 ICA1LQ8NDH6 482 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 PTPN18Q99952 460 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 TRIM4Q9C037 500 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 RHOJQ9H4E5 214 aa13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 GNEQ9Y223 722 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 MTF2Q9Y483 593 aaPredicted RBP13.74□□□□□ -0.21
HERPUD1-204ENST00000439977 FAM95CA0A1B0GW59 222 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 TMEM114B3SHH9 223 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 HHLA1C9JL84 531 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 DDHD2O94830 711 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 ARNTP27540 789 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 TAS2R39P59534 338 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 SCAPQ12770 1279 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 CSHL1Q14406 222 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 PDK3Q15120 406 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 ACAD11Q709F0 780 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 ZNF467Q7Z7K2 595 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 PCDH20Q8N6Y1 951 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 BHLHE22Q8NFJ8 381 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 DQX1Q8TE96 717 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 SHROOM3Q8TF72 1996 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 MAGEB16A2A368 324 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 B3GAT3O94766 335 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 FBXO21O94952 628 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 THP07101 528 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 SLC1A2P43004 574 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 CXCR3P49682 368 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 CRYBB1P53674 252 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 CSE1LP55060 971 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 ADAM17P78536 824 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 ART3Q13508 389 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 SLC12A1Q13621 1099 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 TLR1Q15399 786 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 RBM20Q5T481 1227 aaKnown RBP13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 BNC2Q6ZN30 1099 aaPredicted RBP13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 SATL1Q86VE3 508 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 GALNT15Q8N3T1 639 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 ATPAF2Q8N5M1 289 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 JADE3Q92613 823 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 PHF21BQ96EK2 531 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 TBL1YQ9BQ87 522 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 MCMBPQ9BTE3 642 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 TRPV6Q9H1D0 765 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 TNFRSF12AQ9NP84 129 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 ST3GAL5Q9UNP4 418 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 CDYLQ9Y232 598 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 DTNAQ9Y4J8 743 aa13.73□□□□□ -0.21
HERPUD1-204ENST00000439977 A0A1B0GVG6 124 aa13.72□□□□□ -0.21
HERPUD1-204ENST00000439977 KCNA5P22460 613 aa13.72□□□□□ -0.21
HERPUD1-204ENST00000439977 LRPAP1P30533 357 aa13.72□□□□□ -0.21
HERPUD1-204ENST00000439977 MAXP61244 160 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms