RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 DYRK4Q9NR20 520 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 SEPT11Q9NVA2 429 aaKnown RBP20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 FTSJ1Q9UET6 329 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 DNAI1Q9UI46 699 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 FCF1Q9Y324 198 aaKnown RBP20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 ZFYVE26Q68DK2 2539 aa20.71■□□□□ 0.91
NCKIPSD-206ENST00000439518 PLXNB3Q9ULL4 1909 aa20.7■□□□□ 0.91
NCKIPSD-206ENST00000439518 PTPRBP23467 1997 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 COL5A1P20908 1838 aaPredicted RBP20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 WDFY3Q8IZQ1 3526 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 GOLGA8CPA6NN73 597 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 TEX33O43247 280 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 ITGAVP06756 1048 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 CCNHP51946 323 aaPredicted RBP20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 ZNF143P52747 638 aaPredicted RBP20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 RPL7AP62424 266 aaKnown RBP20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 ANO6Q4KMQ2 910 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 ACAD10Q6JQN1 1059 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 DNAJC24Q6P3W2 148 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 KANSL1Q7Z3B3 1105 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 SLFN11Q7Z7L1 901 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 BAP1Q92560 729 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 PPP1R16AQ96I34 528 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 HEPHQ9BQS7 1158 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 NAT10Q9H0A0 1025 aaKnown RBP20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 RTN4Q9NQC3 1192 aaKnown RBP20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 MYO6Q9UM54 1294 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 ZFR2Q9UPR6 939 aaKnown RBP20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 CA5BQ9Y2D0 317 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 ZFHX4Q86UP3 3567 aa20.7■□□□□ 0.9
NCKIPSD-206ENST00000439518 FAM208BQ5VWN6 2430 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 ARID1BQ8NFD5 2236 aaPredicted RBP20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 SRRM3A6NNA2 597 aaPredicted RBP20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 SLC31A1O15431 190 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 CCP110O43303 1012 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 MAGEC1O60732 1142 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 CCDC172P0C7W6 258 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 PRLRP16471 622 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 ITGB7P26010 798 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 L1CAMP32004 1257 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 BNIP3Q12983 259 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 TMEM259Q4ZIN3 620 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 SFMBT2Q5VUG0 894 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 MCOLN2Q8IZK6 566 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 PYROXD2Q8N2H3 581 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 KLK6Q92876 244 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 VOPP1Q96AW1 172 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 MCEEQ96PE7 176 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 CNPY3Q9BT09 278 aa20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 NOL6Q9H6R4 1146 aaKnown RBP20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 GOLGA4Q13439 2230 aaKnown RBP20.69■□□□□ 0.9
NCKIPSD-206ENST00000439518 RAMP2O60895 175 aa20.68■□□□□ 0.9
NCKIPSD-206ENST00000439518 DNA2P51530 1060 aa20.68■□□□□ 0.9
NCKIPSD-206ENST00000439518 NEK3P51956 506 aa20.68■□□□□ 0.9
NCKIPSD-206ENST00000439518 GEMIN4P57678 1058 aaKnown RBP20.68■□□□□ 0.9
NCKIPSD-206ENST00000439518 KLHDC7BQ96G42 594 aa20.68■□□□□ 0.9
NCKIPSD-206ENST00000439518 TM6SF2Q9BZW4 377 aa20.68■□□□□ 0.9
NCKIPSD-206ENST00000439518 HECAQ9UBI9 543 aaPredicted RBP20.68■□□□□ 0.9
NCKIPSD-206ENST00000439518 KNTC1P50748 2209 aa20.68■□□□□ 0.9
NCKIPSD-206ENST00000439518 APC2O95996 2303 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 ANKRD62A6NC57 917 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 TAF4O00268 1085 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 ENC1O14682 589 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 PCDH8O95206 1070 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 LDOC1O95751 146 aaPredicted RBP20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 ADRB3P13945 408 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 POLD3Q15054 466 aaPredicted RBP20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 SMAD1Q15797 465 aaKnown RBP20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 EFHC2Q5JST6 749 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 SEL1L3Q68CR1 1132 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 SCYL2Q6P3W7 929 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 EID2Q8N6I1 236 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 RTL3Q8N8U3 475 aaKnown RBP20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 VCPIP1Q96JH7 1222 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 TAS2R14Q9NYV8 317 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 FZD10Q9ULW2 581 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 HPCAL4Q9UM19 191 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 FADS3Q9Y5Q0 445 aa20.67■□□□□ 0.9
NCKIPSD-206ENST00000439518 SMTNL1A8MU46 457 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 KDELR3O43731 214 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 AP1G1O43747 822 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 HNRNPA2B1P22626 353 aaKnown RBP20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 EPHB2P29323 1055 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 AKT2P31751 481 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 AIF1P55008 147 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 OGDHQ02218 1023 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 FBXL19Q6PCT2 694 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 PARS2Q7L3T8 475 aaKnown RBP20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 GALNT15Q8N3T1 639 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 TSC1Q92574 1164 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 LRIG1Q96JA1 1093 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 CNDP2Q96KP4 475 aaKnown RBP20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 MYOCQ99972 504 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 ZDHHC6Q9H6R6 413 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 FZD3Q9NPG1 666 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 PCDHGA1Q9Y5H4 931 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 ACACAQ13085 2346 aa20.66■□□□□ 0.9
NCKIPSD-206ENST00000439518 ZSCAN5CA6NGD5 496 aaPredicted RBP20.65■□□□□ 0.9
NCKIPSD-206ENST00000439518 WASH4PA8MWX3 477 aa20.65■□□□□ 0.9
NCKIPSD-206ENST00000439518 GSRP00390 522 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms