RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 IKBKEQ14164 716 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 IL23RQ5VWK5 629 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 KRT80Q6KB66 452 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 CASC4Q6P4E1 433 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 CHRDL2Q6WN34 429 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 PQLC3Q8N755 202 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 SEMA6AQ9H2E6 1030 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 WDR55Q9H6Y2 383 aaPredicted RBP8.7□□□□□ -1.02
HPS4-206ENST00000439453 TBC1D23Q9NUY8 699 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 EBF1Q9UH73 591 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 PSAT1Q9Y617 370 aa8.7□□□□□ -1.02
HPS4-206ENST00000439453 LRRIQ4A6NIV6 560 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 BMP10O95393 424 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 CXCL10P02778 98 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 PSMD7P51665 324 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 AP3M2P53677 418 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 CDH15P55291 814 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 C4orf22Q6V702 233 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 GPR141Q7Z602 305 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 CLVS1Q8IUQ0 354 aaPredicted RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 DEPTORQ8TB45 409 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 HM13Q8TCT9 377 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 DQX1Q8TE96 717 aaKnown RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 TMEM143Q96AN5 459 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 ISOC1Q96CN7 298 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 ACO2Q99798 780 aaKnown RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 ADPGKQ9BRR6 497 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 VPS45Q9NRW7 570 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 GPATCH2LQ9NWQ4 482 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 NEMP1O14524 444 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 MED7O43513 233 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 PRPSAP2O60256 369 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 AMHP03971 560 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 EDN1P05305 212 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 P4HA1P13674 534 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 IL4RP24394 825 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 ZNF143P52747 638 aaPredicted RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 CCL23P55773 120 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 RAB15P59190 212 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 ART3Q13508 389 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 TGFBIQ15582 683 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 CCDC153Q494R4 210 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 MTERF2Q49AM1 385 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 FAM160B1Q5W0V3 765 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 SETD3Q86TU7 594 aaPredicted RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 GPR180Q86V85 440 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 WDR49Q8IV35 697 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 BRSK2Q8IWQ3 736 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 ZSCAN18Q8TBC5 510 aaPredicted RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 ATP6V1E2Q96A05 226 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 MCRS1Q96EZ8 462 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 PPP1R36Q96LQ0 422 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 CROCCQ5TZA2 2017 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 RALGAPA2Q2PPJ7 1873 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 TMEM114B3SHH9 223 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 HBP1O60381 514 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 COL6A2P12110 1019 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 TCN1P20061 433 aaPredicted RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 HMOX2P30519 316 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 TNFSF9P41273 254 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 ASPAP45381 313 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 SLC5A3P53794 718 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 CRADDP78560 199 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 TRPC3Q13507 836 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 EMC2Q15006 297 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 STILQ15468 1287 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 LSM12Q3MHD2 195 aaKnown RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 TMEM240Q5SV17 173 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 FAM102AQ5T9C2 384 aaPredicted RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 MYO1HQ8N1T3 1032 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 C12orf43Q96C57 262 aaKnown RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 CNPY3Q9BT09 278 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 DCUN1D5Q9BTE7 237 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 CLK4Q9HAZ1 481 aaKnown RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 ANLNQ9NQW6 1124 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 COQ6Q9Y2Z9 468 aa8.69□□□□□ -1.02
HPS4-206ENST00000439453 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.69□□□□□ -1.02
HPS4-206ENST00000439453 GCATO75600 419 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 GPD1P21695 349 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 PROZP22891 400 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 PPARGP37231 505 aaPredicted RBP8.68□□□□□ -1.02
HPS4-206ENST00000439453 ESRRGP62508 458 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 SEPT6Q14141 434 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 PDK2Q15119 407 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 SMAD1Q15797 465 aaKnown RBP8.68□□□□□ -1.02
HPS4-206ENST00000439453 CDO1Q16878 200 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 C15orf59Q2T9L4 293 aaPredicted RBP8.68□□□□□ -1.02
HPS4-206ENST00000439453 ZNF699Q32M78 642 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 CDKL3Q8IVW4 592 aaPredicted RBP8.68□□□□□ -1.02
HPS4-206ENST00000439453 FIBCD1Q8N539 461 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 FAM156AQ8NDB6 213 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 PCDH19Q8TAB3 1148 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 ADAM32Q8TC27 787 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 BORCS5Q969J3 196 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 PAIP1Q9H074 479 aaKnown RBP8.68□□□□□ -1.02
HPS4-206ENST00000439453 CDHR5Q9HBB8 845 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 SELENONQ9NZV5 590 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 DOLKQ9UPQ8 538 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 SLC8A2Q9UPR5 921 aa8.68□□□□□ -1.02
HPS4-206ENST00000439453 AP4S1Q9Y587 144 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms