RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 INSL5Q9Y5Q6 135 aa3.27□□□□□ -1.89
HMGB1P18-201ENST00000438801 FER1L6Q2WGJ9 1857 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 ZNF646O15015 1829 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 FAM205AQ6ZU69 1335 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 EVPLQ92817 2033 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 ABCC6O95255 1503 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 PRRC2BQ5JSZ5 2229 aaKnown RBP3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 GOLGA6CA6NDK9 693 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 GOLGA6BA6NDN3 693 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 RHPN2P1A8MT19 583 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 M0QZQ0 153 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 MDM4O15151 490 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 S100BP04271 92 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 GOLGA6DP0CG33 693 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 GALEQ14376 348 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 GFOD2Q3B7J2 385 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 KIAA1755Q5JYT7 1200 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 RAP1GAP2Q684P5 730 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 SLC39A5Q6ZMH5 540 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 RBM23Q86U06 439 aaKnown RBP3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 OR52N4Q8NGI2 321 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 GRAMD1AQ96CP6 724 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 ABHD14AQ9BUJ0 271 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 TAOK3Q9H2K8 898 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 PRDM16Q9HAZ2 1276 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 SIRT3Q9NTG7 399 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 GOLGA6AQ9NYA3 693 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 MYO6Q9UM54 1294 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 SLC8A2Q9UPR5 921 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 FLNAP21333 2647 aaKnown RBP3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 COL5A2P05997 1499 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 TAF1LQ8IZX4 1826 aa3.26□□□□□ -1.89
HMGB1P18-201ENST00000438801 RGPD8O14715 1765 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 A0A0G2JMZ2 1700 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 OR2W5A6NFC9 320 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 SRRM3A6NNA2 597 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 J3QKU1 62 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 PODXLO00592 558 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 TSPAN6O43657 245 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 PAPSS2O95340 614 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 MYL4P12829 197 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 CBFBQ13951 182 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 SLC5A9Q2M3M2 681 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 KRTAP27-1Q3LI81 207 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 INO80DQ53TQ3 878 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 WASHC2DQ5SRD0 308 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 C9orf50Q5SZB4 431 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 KLHDC7AQ5VTJ3 777 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 NADSYN1Q6IA69 706 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 PARM1Q6UWI2 310 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 C16orf89Q6UX73 402 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 USP50Q70EL3 339 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 NR2C2APQ86WQ0 139 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 FAM177A1Q8N128 213 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 C7orf57Q8NEG2 295 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 JDP2Q8WYK2 163 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 ZNF347Q96SE7 839 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 LBHD1Q9BQE6 289 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 NUDT22Q9BRQ3 303 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 PCDHAC1Q9H158 963 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 ISCUQ9H1K1 167 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 MAP6D1Q9H9H5 199 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 SPAG4Q9NPE6 437 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 GJB4Q9NTQ9 266 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 OBP2AQ9NY56 170 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 TCEAL9Q9UHQ7 104 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 TRIP12Q14669 1992 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 PALLDQ8WX93 1383 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 PKD1L1Q8TDX9 2849 aa3.25□□□□□ -1.89
HMGB1P18-201ENST00000438801 DOPEY2Q9Y3R5 2298 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 C4BP0C0L5 1744 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 COL5A3P25940 1745 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 CCDC141Q6ZP82 1450 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 MBD5Q9P267 1494 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 FOXO6A8MYZ6 492 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 PPP6R2O75170 966 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 CNTN5O94779 1100 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 NFATC1O95644 943 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 VIPP01282 170 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 KLKB1P03952 638 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 HOXC6P09630 235 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 IDEP14735 1019 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 PECAM1P16284 738 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 FGFR2P21802 821 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 TGM2P21980 687 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 EPS15P42566 896 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 RRP1P56182 461 aaKnown RBP3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 DSCR9P59020 149 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 ROR2Q01974 943 aaKnown RBP3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 ZNF543Q08ER8 600 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 ARHGAP15Q53QZ3 475 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 Q5PR19 223 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 TTC39AQ5SRH9 613 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 HMBOX1Q6NT76 420 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 CYB5R4Q7L1T6 521 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 BEND5Q7L4P6 421 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 MORC1Q86VD1 984 aa3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 PAQR4Q8N4S7 273 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 SRFBP1Q8NEF9 429 aaKnown RBP3.24□□□□□ -1.89
HMGB1P18-201ENST00000438801 KCNG4Q8TDN1 519 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms