RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GM2AP17900 193 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 TPSB2P20231 275 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 PPM1AP35813 382 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 HADHAP40939 763 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 AP2B1P63010 937 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 TPSAB1Q15661 275 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 NUDT18Q6ZVK8 323 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 ICA1LQ8NDH6 482 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 KCTD13Q8WZ19 329 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 NMD3Q96D46 503 aaKnown RBP11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 CORO1BQ9BR76 489 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 TMEM120AQ9BXJ8 343 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 BATF3Q9NR55 127 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 MIOSQ9NXC5 875 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 ZNF623O75123 536 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 VPS26AO75436 327 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 GCATO75600 419 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 PTPN7P35236 360 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 IRX1P78414 480 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 CNGA3Q16281 694 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 NSL1Q96IY1 281 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 APOL5Q9BWW9 433 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 TM6SF2Q9BZW4 377 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 PRKAG3Q9UGI9 489 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 CNTRLQ7Z7A1 2325 aa11.73□□□□□ -0.53
TRAPPC9-202ENST00000438773 CFAP99D6REC4 459 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 METTL18O95568 372 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 HIST1H2AGP0C0S8 130 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 HIST1H2ADP20671 130 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 SATB1Q01826 763 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 NAB1Q13506 487 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 AARS2Q5JTZ9 985 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 LAYNQ6UX15 382 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 ZNF280BQ86YH2 543 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 RNF148Q8N7C7 305 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 HIST1H2AHQ96KK5 128 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 ZBTB18Q99592 522 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 HIST1H2AJQ99878 128 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 H2AFJQ9BTM1 129 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 EFHD1Q9BUP0 239 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 CRYL1Q9Y2S2 319 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 IRAK2O43187 625 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 TRIM13O60858 407 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 UNC5CO95185 931 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 MPOP05164 745 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 TFE3P19532 575 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 WDR4P57081 412 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 GLT6D1Q7Z4J2 308 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 SLC44A1Q8WWI5 657 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 DRC3Q9H069 523 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 PAPOLBQ9NRJ5 636 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 IL1RAPL1Q9NZN1 696 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 NCKIPSDQ9NZQ3 722 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 MAP3K13O43283 966 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 FAM155BO75949 473 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 ASMTLO95671 621 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 TBX18O95935 607 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 ITGA2BP08514 1039 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 CTNNB1P35222 781 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 KLF1Q13351 362 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 HIC1Q14526 733 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 LRRC8BQ6P9F7 803 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 RFWD3Q6PCD5 774 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 CCDC149Q6ZUS6 474 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 POU5F2Q8N7G0 328 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 SPATA22Q8NHS9 363 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 ZNF483Q8TF39 744 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 PHF21BQ96EK2 531 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 PPP1R10Q96QC0 940 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 C2orf49Q9BVC5 232 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 RGS18Q9NS28 235 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 CDYLQ9Y232 598 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 TCRBV7S3A2A0A539 114 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 KCNU1A8MYU2 1149 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 TPST1O60507 370 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 DDHD2O94830 711 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 SERPINE1P05121 402 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 ADH1AP07327 375 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 MLNP12872 115 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 GABRR2P28476 465 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 HMOX2P30519 316 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 KRT33BQ14525 404 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 TTC23LQ6PF05 361 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 IYDQ6PHW0 289 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 KYAT3Q6YP21 454 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 NTAN1Q96AB6 310 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 CMTM5Q96DZ9 223 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 NPY6RQ99463 290 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 CLPBQ9H078 707 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 UNC93B1Q9H1C4 597 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 NMRAL1Q9HBL8 299 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.72□□□□□ -0.533e-7■■■■□ 24.4
TRAPPC9-202ENST00000438773 SLC25A13Q9UJS0 675 aa11.72□□□□□ -0.53
TRAPPC9-202ENST00000438773 CARNS1A5YM72 827 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 BEST1O76090 585 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 CXCL14O95715 111 aa11.71□□□□□ -0.53
TRAPPC9-202ENST00000438773 ITGBL1O95965 494 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms