RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 TCEA2Q15560 299 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 ACCSLQ4AC99 568 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 ESRP1Q6NXG1 681 aaKnown RBP12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 NYAP1Q6ZVC0 841 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 Q6ZVU0 165 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 HEATR4Q86WZ0 1026 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 NELFCDQ8IXH7 590 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 Q8N9G6 341 aaPredicted RBP12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 PARD3BQ8TEW8 1205 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 APOBEC3GQ9HC16 384 aaKnown RBP12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 CASS4Q9NQ75 786 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 APOBEC3BQ9UH17 382 aaKnown RBP12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 CSMD2Q7Z408 3487 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 HIVEP3Q5T1R4 2406 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 FBN3Q75N90 2809 aa12.6□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 ESPL1Q14674 2120 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 MCF2LO15068 1137 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 CD2BP2O95400 341 aaKnown RBP12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 ASS1P00966 412 aaKnown RBP12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 TSHRP16473 764 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 RABIFP47224 123 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 CLDN10P78369 228 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 C16orf72Q14CZ0 275 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 MS4A13Q5J8X5 152 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 EPM2AIP1Q7L775 607 aaPredicted RBP12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 ZC3H18Q86VM9 953 aaKnown RBP12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 IL22RA1Q8N6P7 574 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 TEX19Q8NA77 164 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 ZNF507Q8TCN5 953 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 CATSPER2Q96P56 530 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 SLC17A9Q9BYT1 436 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 PANK2Q9BZ23 570 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 IRX2Q9BZI1 471 aaPredicted RBP12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 UBXN6Q9BZV1 441 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 RNF215Q9Y6U7 377 aa12.59□□□□□ -0.39
SMAD9-IT1-201ENST00000437983 ZNF891A8MT65 544 aaPredicted RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 KPNA3O00505 521 aaPredicted RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 DDAH2O95865 285 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 PDGFRAP16234 1089 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ITGB7P26010 798 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 OAS2P29728 719 aaKnown RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ATP1A2P50993 1020 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 DLG2Q15700 870 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 EIF2S3LQ2VIR3 472 aaKnown RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 DEFB109BQ30KR1 87 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ZACNQ401N2 412 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ATP1A1-AS1Q5TC04 95 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 SV2AQ7L0J3 742 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ANKMY2Q8IV38 441 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CCDC117Q8IWD4 279 aaPredicted RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 UNC45BQ8IWX7 931 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CCDC65Q8IXS2 484 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 PHACTR4Q8IZ21 702 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 KCTD12Q96CX2 325 aaKnown RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 HEXIM2Q96MH2 286 aaKnown RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 KLF6Q99612 283 aaPredicted RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CMKLR1Q99788 373 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 KRTAP3-3Q9BYR6 98 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 KRTAP3-2Q9BYR7 98 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 SEMA6CQ9H3T2 930 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 DONSONQ9NYP3 566 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CCDC39Q9UFE4 941 aa12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 XPO7Q9UIA9 1087 aaKnown RBP12.58□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 AKAP9Q99996 3911 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 TRPM6Q9BX84 2022 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 TYW5A2RUC4 315 aaKnown RBP12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 EXOC3O60645 756 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CNTN5O94779 1100 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 TRIM21P19474 475 aaKnown RBP12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 UGT1A3P35503 534 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 TBX4P57082 545 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ADIGQ0VDE8 80 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 PHF19Q5T6S3 580 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 STXBP4Q6ZWJ1 553 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CIR1Q86X95 450 aaPredicted RBP12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 SLITRK4Q8IW52 837 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ARL10Q8N8L6 244 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 PCDH19Q8TAB3 1148 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 PDCD6IPQ8WUM4 868 aaKnown RBP12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 BTN2A2Q8WVV5 523 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 APOBEC4Q8WW27 367 aaKnown RBP12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 AZIN2Q96A70 460 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 TCTN2Q96GX1 697 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CLIC6Q96NY7 704 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 SLC6A16Q9GZN6 736 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 PRDM8Q9NQV8 689 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ABCC13Q9NSE7 274 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 NAALADL1Q9UQQ1 740 aa12.57□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 TTLL8A6PVC2 850 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 EFCAB7A8K855 629 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 ALOX15BO15296 676 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 EIF3DO15371 548 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 HLA-DRAP01903 254 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 RPN1P04843 607 aaKnown RBP12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 AP3M2P53677 418 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 PFN3P60673 137 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CDC20Q12834 499 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 MSANTD2Q6P1R3 559 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CCNJLQ8IV13 435 aa12.56□□□□□ -0.4
SMAD9-IT1-201ENST00000437983 CACNA2D3Q8IZS8 1091 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms