RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 MUSKO15146 869 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 CLDN11O75508 207 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 RPA3P35244 121 aaPredicted RBP21.44■■□□□ 1.02
PTPRF-207ENST00000436724 ADRA1AP35348 466 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 CCR2P41597 374 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 CD86P42081 329 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 ACTN3Q08043 901 aaPredicted RBP21.44■■□□□ 1.02
PTPRF-207ENST00000436724 LBRQ14739 615 aaKnown RBP21.44■■□□□ 1.02
PTPRF-207ENST00000436724 TMEM135Q86UB9 458 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 CACNA2D3Q8IZS8 1091 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 NSMCE1Q8WV22 266 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 TTC17Q96AE7 1141 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 IMP4Q96G21 291 aaKnown RBP21.44■■□□□ 1.02
PTPRF-207ENST00000436724 SMG9Q9H0W8 520 aaKnown RBP21.44■■□□□ 1.02
PTPRF-207ENST00000436724 PDFQ9HBH1 243 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 A0A1B0GVM2 712 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 TCAF2A6NFQ2 919 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 PSMD3O43242 534 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 MMP2P08253 660 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 NPY2RP49146 381 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 POU6F1Q14863 301 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 GKAP1Q5VSY0 366 aaPredicted RBP21.44■■□□□ 1.02
PTPRF-207ENST00000436724 CNPY4Q8N129 248 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 DYDC1Q8WWB3 177 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 LBHD1Q9BQE6 289 aaPredicted RBP21.44■■□□□ 1.02
PTPRF-207ENST00000436724 IL22Q9GZX6 179 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 MAGEH1Q9H213 219 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 PSAT1Q9Y617 370 aa21.44■■□□□ 1.02
PTPRF-207ENST00000436724 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.43■■□□□ 1.02
PTPRF-207ENST00000436724 ZCWPW2A0A1B0GU75 182 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 TRIM49D1C9J1S8 452 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 TYROBPO43914 113 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 F7P08709 466 aaPredicted RBP21.43■■□□□ 1.02
PTPRF-207ENST00000436724 CA4P22748 312 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 WNT3AP56704 352 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 ZNF177Q13360 481 aaPredicted RBP21.43■■□□□ 1.02
PTPRF-207ENST00000436724 PPM1LQ5SGD2 360 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 CYS1Q717R9 158 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 ELMOD1Q8N336 334 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 C12orf65Q9H3J6 166 aaKnown RBP21.43■■□□□ 1.02
PTPRF-207ENST00000436724 ZNF180Q9UJW8 692 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 STOML2Q9UJZ1 356 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 HMX2A2RU54 273 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 MT-ND3P03897 115 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 RHOCP08134 193 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 NMBRP28336 390 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 WDR4P57081 412 aaKnown RBP21.43■■□□□ 1.02
PTPRF-207ENST00000436724 SPRED3Q2MJR0 410 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 ANKRD20A4Q4UJ75 823 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 SPANXN3Q5MJ09 141 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 TTC39BQ5VTQ0 682 aaPredicted RBP21.43■■□□□ 1.02
PTPRF-207ENST00000436724 KDELC1Q6UW63 502 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 RANBP10Q6VN20 620 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 CCDC121Q6ZUS5 278 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 CERS2Q96G23 380 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 ASAH2Q9NR71 780 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 NKIRAS1Q9NYS0 192 aa21.43■■□□□ 1.02
PTPRF-207ENST00000436724 C5orf42Q9H799 3197 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 TRANK1O15050 2925 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 MYLKQ15746 1914 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 PRPF4O43172 522 aaKnown RBP eCLIP21.42■■□□□ 1.027e-7■■■□□ 16.8
PTPRF-207ENST00000436724 TBL1XO60907 577 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 FSCBQ5H9T9 825 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 MROH9Q5TGP6 573 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 TMCO4Q5TGY1 634 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 CXorf57Q6NSI4 855 aaKnown RBP21.42■■□□□ 1.02
PTPRF-207ENST00000436724 Q6ZNB5 142 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 SLC25A41Q8N5S1 370 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 ARRDC2Q8TBH0 407 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 TCEAL4Q96EI5 215 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 PAIP2Q9BPZ3 127 aaKnown RBP21.42■■□□□ 1.02
PTPRF-207ENST00000436724 SLC46A2Q9BY10 475 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 CCDC134Q9H6E4 229 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 MAN1C1Q9NR34 630 aa21.42■■□□□ 1.02
PTPRF-207ENST00000436724 MTCL1Q9Y4B5 1905 aaKnown RBP21.42■■□□□ 1.02
PTPRF-207ENST00000436724 USP1O94782 785 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 CA3P07451 260 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 EPCAMP16422 314 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 HNRNPH1P31943 449 aaKnown RBP21.41■■□□□ 1.02
PTPRF-207ENST00000436724 CHST9Q7L1S5 443 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.41■■□□□ 1.02
PTPRF-207ENST00000436724 DENND1AQ8TEH3 1009 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 MTIF3Q9H2K0 278 aaKnown RBP21.41■■□□□ 1.02
PTPRF-207ENST00000436724 ATP13A1Q9HD20 1204 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 CFAP97Q9P2B7 532 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 SOX13Q9UN79 622 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 TBC1D30Q9Y2I9 924 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 FAM237BA0A1B0GVD1 139 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 PER2O15055 1255 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 KRT37O76014 449 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 C1RP00736 705 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 SNRPAP09012 282 aaKnown RBP21.41■■□□□ 1.02
PTPRF-207ENST00000436724 PYGBP11216 843 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 MPP3Q13368 585 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 SLC1A5Q15758 541 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 RNF219Q5W0B1 726 aaPredicted RBP21.41■■□□□ 1.02
PTPRF-207ENST00000436724 PIGWQ7Z7B1 504 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 RASSF3Q86WH2 238 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 LRRC34Q8IZ02 419 aa21.41■■□□□ 1.02
PTPRF-207ENST00000436724 CARNMT1Q8N4J0 409 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms