RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SPATA31A1Q5TZJ5 1347 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CCT8L1PA6NM43 557 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ZNF185O15231 689 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ADSLP30566 484 aaPredicted RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CASP4P49662 377 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 NDST1P52848 882 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 HYIQ5T013 277 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CHSY3Q70JA7 882 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 FAM81AQ8TBF8 368 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ANKS1AQ92625 1134 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 POPDC2Q9HBU9 364 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 FKBP14Q9NWM8 211 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TAGLN3Q9UI15 199 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 PHTF1Q9UMS5 762 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 RAD51CO43502 376 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ASNA1O43681 348 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 MAPTP10636 758 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 BDNFP23560 247 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 GYS2P54840 703 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CBX2Q14781 532 aaPredicted RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ACAP1Q15027 740 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 MAP1SQ66K74 1059 aaPredicted RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 PYHIN1Q6K0P9 492 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 LINC00116Q8NCU8 138 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 UBASH3BQ8TF42 649 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TBC1D14Q9P2M4 693 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CDH9Q9ULB4 789 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 RHPN2P1A8MT19 583 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 A8MX80 341 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 IDH3BO43837 385 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TBL1XO60907 577 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 FARP2O94887 1054 aaPredicted RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 SEMA3DO95025 777 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 VIPP01282 170 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ERVK-9P63128 1117 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ERVK-24P63145 666 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 MAPK7Q13164 816 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 FRG1Q14331 258 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ZNF268Q14587 947 aaPredicted RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 ZNF470Q6ECI4 717 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TMC5Q6UXY8 1006 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CCDC80Q76M96 950 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 DET1Q7L5Y6 550 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 CDH24Q86UP0 819 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 MTFMTQ96DP5 389 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TRNT1Q96Q11 434 aaKnown RBP11.32□□□□□ -0.6
SCN4A-201ENST00000435607 C9orf16Q9BUW7 83 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 TRIM2Q9C040 744 aa11.32□□□□□ -0.6
SCN4A-201ENST00000435607 IRGMA1A4Y4 181 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ETS1P14921 441 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ITGA3P26006 1051 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 SREBF1P36956 1147 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 CCR3P51677 355 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 VBP1P61758 197 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 HSPA14Q0VDF9 509 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 AMIGO1Q86WK6 493 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 HEATR4Q86WZ0 1026 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 DHFR2Q86XF0 187 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ST3GAL5Q9UNP4 418 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 CROCC2H7BZ55 1655 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 RSL1D1O76021 490 aaKnown RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 STARP49675 285 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ZDHHC20Q5W0Z9 365 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 STAG3L4Q8TBR4 150 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 HTR3CQ8WXA8 447 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 CD101Q93033 1021 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 MAT2BQ9NZL9 334 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 DMGDHQ9UI17 866 aaKnown RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 KIF1CO43896 1103 aaKnown RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 LCA5LO95447 670 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ELFN1P0C7U0 828 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 PRLRP16471 622 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 CDH5P33151 784 aaPredicted RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ARL3P36405 182 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 RPIAP49247 311 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 CDK7P50613 346 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 UGT2B15P54855 530 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 MYL6P60660 151 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 TEX47Q8TBZ9 253 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ZNF483Q8TF39 744 aaPredicted RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ERLEC1Q96DZ1 483 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 MTMR9Q96QG7 549 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 A0A1W2PQ72 361 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 KERAO60938 352 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 MLYCDO95822 493 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 SP100P23497 879 aaPredicted RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 GMFBP60983 142 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 SMARCB1Q12824 385 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 TRIM40Q6P9F5 258 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 ZC3H7AQ8IWR0 971 aaKnown RBP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 DEPDC4Q8N2C3 294 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 SGCDQ92629 289 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 QKIQ96PU8 341 aaKnown RBP eCLIP11.31□□□□□ -0.6
SCN4A-201ENST00000435607 FBXO28Q9NVF7 368 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 PTGFRNQ9P2B2 879 aa11.31□□□□□ -0.6
SCN4A-201ENST00000435607 GPC6Q9Y625 555 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms