RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 ZNF462Q96JM2 2506 aa15.19■□□□□ 0.02
PRKDC-203ENST00000432581 SETXQ7Z333 2677 aaKnown RBP15.19■□□□□ 0.02
PRKDC-203ENST00000432581 LY6G6EA0A0G2JKS1 128 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 SPTY2D1-AS1A0A0U1RR47 76 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 K7ESM1 405 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 ERVH48-1M5A8F1 160 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 RNF103O00237 685 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 FOXN3O00409 490 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 AP1G1O43747 822 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 LZTS3O60299 673 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 USP12O75317 370 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 CSO75390 466 aaKnown RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 ZNF821O75541 412 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 CSF2P04141 144 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 MPOP05164 745 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 NME1P15531 152 aaKnown RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 L1CAMP32004 1257 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 CDH5P33151 784 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 MTIF2P46199 727 aaKnown RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 RABIFP47224 123 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 GABRB2P47870 512 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 TMPRSS3P57727 454 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 MAPK8IP2Q13387 824 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 FAM102AQ5T9C2 384 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 ZCCHC8Q6NZY4 707 aaKnown RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 PARGQ86W56 976 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 FAM71AQ8IYT1 594 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 ZNF548Q8NEK5 533 aaPredicted RBP15.18■□□□□ 0.02
PRKDC-203ENST00000432581 OR7D4Q8NG98 312 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 IFI44Q8TCB0 444 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 MAPK15Q8TD08 544 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 GRAMD1AQ96CP6 724 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 C18orf8Q96DM3 657 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 BMFQ96LC9 184 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 TBCBQ99426 244 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 SPON2Q9BUD6 331 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 SIX2Q9NPC8 291 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 PLCB1Q9NQ66 1216 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 FADS3Q9Y5Q0 445 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 CSNK1G3Q9Y6M4 447 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 U3KQA8 63 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 CFAP46Q8IYW2 2715 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 BPTFQ12830 3046 aa15.18■□□□□ 0.02
PRKDC-203ENST00000432581 CXorf51AA0A1B0GTR3 108 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 POM121BA6NF01 834 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 SRGAP2O75044 1071 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 ZMPSTE24O75844 475 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 ENDOD1O94919 500 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 PAK4O96013 591 aaPredicted RBP15.17■□□□□ 0.02
PRKDC-203ENST00000432581 DNA2P51530 1060 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 RHDQ02161 417 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 SGCGQ13326 291 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 FGL2Q14314 439 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 FZD2Q14332 565 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 ZNF542PQ5EBM4 170 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 CARD16Q5EG05 197 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 ZNF605Q86T29 641 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 IRF2BP1Q8IU81 584 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 ZNF843Q8N446 348 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 RAB7BQ96AH8 199 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 NAF1Q96HR8 494 aaKnown RBP15.17■□□□□ 0.02
PRKDC-203ENST00000432581 LENG8Q96PV6 779 aaPredicted RBP15.17■□□□□ 0.02
PRKDC-203ENST00000432581 ZYG11BQ9C0D3 744 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 ATP13A1Q9HD20 1204 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 THSD1Q9NS62 852 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 KIAA1468Q9P260 1216 aa15.17■□□□□ 0.02
PRKDC-203ENST00000432581 IPO11Q9UI26 975 aaKnown RBP15.17■□□□□ 0.02
PRKDC-203ENST00000432581 AJAP1Q9UKB5 411 aaPredicted RBP15.17■□□□□ 0.02
PRKDC-203ENST00000432581 MYLKQ15746 1914 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 FPGTO14772 594 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 TSPAN6O43657 245 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 GADD45BO75293 160 aaPredicted RBP15.16■□□□□ 0.02
PRKDC-203ENST00000432581 NEBLO76041 1014 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 PNMA6AP0CW24 399 aaPredicted RBP15.16■□□□□ 0.02
PRKDC-203ENST00000432581 MYF5P13349 255 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 PLA2G2AP14555 144 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 ETFBP38117 255 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 CCNHP51946 323 aaPredicted RBP15.16■□□□□ 0.02
PRKDC-203ENST00000432581 GNA12Q03113 381 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 CFHR1Q03591 330 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 TAF1BQ53T94 588 aaPredicted RBP15.16■□□□□ 0.02
PRKDC-203ENST00000432581 IGF2-ASQ6U949 168 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 PARS2Q7L3T8 475 aaKnown RBP15.16■□□□□ 0.02
PRKDC-203ENST00000432581 XYLT1Q86Y38 959 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 PLPP6Q8IY26 295 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 MSANTD4Q8NCY6 345 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 DENND6BQ8NEG7 585 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 TPCN2Q8NHX9 752 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 KCNE4Q8WWG9 221 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 ASB12Q8WXK4 309 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 ISG20Q96AZ6 181 aaKnown RBP15.16■□□□□ 0.02
PRKDC-203ENST00000432581 WBP1Q96G27 269 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 C1QTNF2Q9BXJ5 285 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 DPH1Q9BZG8 443 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 OSBPL2Q9H1P3 480 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 TMPRSS4Q9NRS4 437 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 PPARGC1AQ9UBK2 798 aaKnown RBP15.16■□□□□ 0.02
PRKDC-203ENST00000432581 ZNF212Q9UDV6 495 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 SALL4Q9UJQ4 1053 aa15.16■□□□□ 0.02
PRKDC-203ENST00000432581 RAD51BO15315 384 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms