RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 ZNF548Q8NEK5 533 aaPredicted RBP8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 OR13H1Q8NG92 308 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 UBA3Q8TBC4 463 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 LMX1AQ8TE12 382 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 SNRNP27Q8WVK2 155 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 BTN2A2Q8WVV5 523 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 SCG3Q8WXD2 468 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 KCTD13Q8WZ19 329 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 SGF29Q96ES7 293 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 BTN2A3PQ96KV6 586 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 MRGPRX3Q96LB0 322 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 PRICKLE1Q96MT3 831 aaPredicted RBP8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 SLC46A1Q96NT5 459 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 MIS12Q9H081 205 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 MUC3BQ9H195 1237 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 NUCKS1Q9H1E3 243 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 FAM204AQ9H8W3 233 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 FZD3Q9NPG1 666 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 DMAC2Q9NW81 257 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 RAB20Q9NX57 234 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 AKAP7Q9P0M2 348 aaPredicted RBP8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 SLCO3A1Q9UIG8 710 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 KIAA1257Q9ULG3 409 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 ATXN7L1Q9ULK2 861 aaPredicted RBP8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 TLR6Q9Y2C9 796 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 CA5BQ9Y2D0 317 aa8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 TDRD6O60522 2096 aaKnown RBP8.05□□□□□ -1.12
ECHDC1-207ENST00000430841 TCAF2A6NFQ2 919 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 K7ESM1 405 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 FPGTO14772 594 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 AQP9O43315 295 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 MYL1P05976 194 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 ANXA6P08133 673 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 MYF5P13349 255 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 TACR2P21452 398 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 COL8A1P27658 744 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 NOS2P35228 1153 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 DRD3P35462 400 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 RABIFP47224 123 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 RELBQ01201 579 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 ENPEPQ07075 957 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 CETN1Q12798 172 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 STK4Q13043 487 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 MTA1Q13330 715 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 EIF3IQ13347 325 aaKnown RBP8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 ADAM9Q13443 819 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 CUL2Q13617 745 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 FOXD4L6Q3SYB3 417 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 C8orf34Q49A92 452 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 ZNF542PQ5EBM4 170 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 AGBL4Q5VU57 503 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 OR6B2Q6IFH4 312 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 GUSBP11Q6P575 273 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 CRTC1Q6UUV9 634 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 FOXD4L3Q6VB84 417 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 Q6ZSR6 202 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 LURAP1LQ8IV03 231 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 GRAMD1CQ8IYS0 662 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 SLC25A45Q8N413 288 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 FBXO39Q8N4B4 442 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 ATP11CQ8NB49 1132 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 GALNT6Q8NCL4 622 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 KIAA0895Q8NCT3 520 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 GRIN3AQ8TCU5 1115 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 PTPRN2Q92932 1015 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 EXTL1Q92935 676 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 MYO19Q96H55 970 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 RPRD1AQ96P16 312 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 CITED4Q96RK1 184 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 FAM129BQ96TA1 746 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 TSG101Q99816 390 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 SLC13A1Q9BZW2 595 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 ZNF395Q9H8N7 513 aaPredicted RBP8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 SPASTQ9UBP0 616 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 INTS6Q9UL03 887 aaKnown RBP8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 PAXBP1Q9Y5B6 917 aa8.04□□□□□ -1.12
ECHDC1-207ENST00000430841 LRRK2Q5S007 2527 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 SYNJ2BP-COX16A0A087WUM0 186 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 CYSRT1A8MQ03 144 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 TULP2O00295 520 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 PLD2O14939 933 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 CETN3O15182 167 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 NEBLO76041 1014 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 IGLV3-27P01718 113 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 FAM87AP0C7U9 286 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 VAV1P15498 845 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 TGM2P21980 687 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 ACADSBP45954 432 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 NOP2P46087 812 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 CLDN2P57739 230 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 RPS21P63220 83 aaKnown RBP8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 PPP3CAQ08209 521 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 CLN3Q13286 438 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 PTK2BQ14289 1009 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 DLG2Q15700 870 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 DEFB133Q30KQ1 61 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 FSCBQ5H9T9 825 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 COLEC12Q5KU26 742 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 NADSYN1Q6IA69 706 aa8.03□□□□□ -1.12
ECHDC1-207ENST00000430841 KIAA1161Q6NSJ0 714 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms