RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 RFTN1Q14699 578 aaPredicted RBP15.24■□□□□ 0.03
LINC00839-202ENST00000429940 KIZQ2M2Z5 673 aa15.24■□□□□ 0.03
LINC00839-202ENST00000429940 BNIPLQ7Z465 357 aa15.24■□□□□ 0.03
LINC00839-202ENST00000429940 ZC3HC1Q86WB0 502 aaKnown RBP15.24■□□□□ 0.03
LINC00839-202ENST00000429940 LSMEM2Q8N112 164 aa15.24■□□□□ 0.03
LINC00839-202ENST00000429940 CNTD1Q8N815 330 aa15.24■□□□□ 0.03
LINC00839-202ENST00000429940 STON2Q8WXE9 905 aa15.24■□□□□ 0.03
LINC00839-202ENST00000429940 WNT8BQ93098 351 aa15.24■□□□□ 0.03
LINC00839-202ENST00000429940 GINS2Q9Y248 185 aa15.24■□□□□ 0.03
LINC00839-202ENST00000429940 COPG1Q9Y678 874 aaKnown RBP15.24■□□□□ 0.03
LINC00839-202ENST00000429940 COL1A2P08123 1366 aa15.24■□□□□ 0.03
LINC00839-202ENST00000429940 ACOT8O14734 319 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 SPTLC1O15269 473 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 SLC10A3P09131 477 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 CYP2C9P11712 490 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 NFKB1P19838 968 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 INHBCP55103 352 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 TPI1P60174 286 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 SLC12A1Q13621 1099 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 APOFQ13790 326 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 SLC27A1Q6PCB7 646 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 ZNF410Q86VK4 478 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 FSTL5Q8N475 847 aaPredicted RBP15.23■□□□□ 0.03
LINC00839-202ENST00000429940 TMEM102Q8N9M5 508 aaPredicted RBP15.23■□□□□ 0.03
LINC00839-202ENST00000429940 FAM156AQ8NDB6 213 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 DDI1Q8WTU0 396 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 STYXQ8WUJ0 223 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 DNAI2Q9GZS0 605 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 NSMCE4AQ9NXX6 385 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 EPS15L1Q9UBC2 864 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 NCAM2O15394 837 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 TRPA1O75762 1119 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 RNASEH2AO75792 299 aaKnown RBP15.23■□□□□ 0.03
LINC00839-202ENST00000429940 CAPNS1P04632 268 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 SLC35E2BP0CK96 405 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 HOXA11P31270 313 aaPredicted RBP15.23■□□□□ 0.03
LINC00839-202ENST00000429940 ADRA1BP35368 520 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 NDUFV1P49821 464 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 ZBTB17Q13105 803 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 PTK2BQ14289 1009 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 USP41Q3LFD5 358 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 ITPRIPL1Q6GPH6 555 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 LRRC8EQ6NSJ5 796 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 PAOXQ6QHF9 649 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 NPWQ8N729 165 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 APPL2Q8NEU8 664 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 MRPL1Q9BYD6 325 aaKnown RBP15.23■□□□□ 0.03
LINC00839-202ENST00000429940 SENP6Q9GZR1 1112 aaPredicted RBP15.23■□□□□ 0.03
LINC00839-202ENST00000429940 RHOJQ9H4E5 214 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 DDX18Q9NVP1 670 aaKnown RBP15.23■□□□□ 0.03
LINC00839-202ENST00000429940 UBP1Q9NZI7 540 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 ADA2Q9NZK5 511 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 RAD54BQ9Y620 910 aa15.23■□□□□ 0.03
LINC00839-202ENST00000429940 ARHGAP10A1A4S6 786 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TCAF2A6NFQ2 919 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TRIM38O00635 465 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 DLX3O60479 287 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 AOC2O75106 756 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 USP46P62068 366 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TBC1D25Q3MII6 688 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 SH2D4BQ5SQS7 431 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 SLC41A1Q8IVJ1 513 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 CENPLQ8N0S6 344 aaPredicted RBP15.22■□□□□ 0.03
LINC00839-202ENST00000429940 CCNYL1Q8N7R7 359 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 RNF169Q8NCN4 708 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TNIP3Q96KP6 325 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 DUSP16Q9BY84 665 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 LRRC4Q9HBW1 653 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 XPR1Q9UBH6 696 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TRHDEQ9UKU6 1024 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 UBQLN1Q9UMX0 589 aaKnown RBP15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TMEM233B4DJY2 109 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 CLDN5O00501 218 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 PIRO00625 290 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 HNRNPRO43390 633 aaKnown RBP15.22■□□□□ 0.03
LINC00839-202ENST00000429940 BEST1O76090 585 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 RECQL4O94761 1208 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 PYGLP06737 847 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 NR1H2P55055 460 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TMEM62Q0P6H9 643 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TAF1CQ15572 869 aaPredicted RBP15.22■□□□□ 0.03
LINC00839-202ENST00000429940 IL23RQ5VWK5 629 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 HFE2Q6ZVN8 426 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 CATSPER4Q7RTX7 472 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 IFNL1Q8IU54 200 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 SIX6OS1Q8N1H7 587 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 B3GALNT2Q8NCR0 500 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 ZSCAN18Q8TBC5 510 aaPredicted RBP15.22■□□□□ 0.03
LINC00839-202ENST00000429940 EME1Q96AY2 570 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 SLC2A13Q96QE2 648 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 SLC2A11Q9BYW1 496 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 NXF3Q9H4D5 531 aaKnown RBP15.22■□□□□ 0.03
LINC00839-202ENST00000429940 ANLNQ9NQW6 1124 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 HSFX1Q9UBD0 423 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 CNOT11Q9UKZ1 510 aaKnown RBP15.22■□□□□ 0.03
LINC00839-202ENST00000429940 SLC45A1Q9Y2W3 748 aa15.22■□□□□ 0.03
LINC00839-202ENST00000429940 TARM1B6A8C7 271 aa15.21■□□□□ 0.03
LINC00839-202ENST00000429940 MTSS1O43312 755 aa15.21■□□□□ 0.03
LINC00839-202ENST00000429940 PSMC3P17980 439 aa15.21■□□□□ 0.03
LINC00839-202ENST00000429940 AKAP5P24588 427 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms