RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 ADCY6O43306 1168 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 PEX11AO75192 247 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 SLC25A12O75746 678 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 CCDC166P0CW27 439 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 UBA1P22314 1058 aaKnown RBP15.57■□□□□ 0.08
PTPRF-206ENST00000429895 PRKAA2P54646 552 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 SRP54P61011 504 aaKnown RBP15.57■□□□□ 0.08
PTPRF-206ENST00000429895 GCNT1Q02742 428 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 TRAF3Q13114 568 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 STXBP5Q5T5C0 1151 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 FUT8Q9BYC5 575 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 SNX6Q9UNH7 406 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 ABCA6Q8N139 1617 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 KDELR1P24390 212 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 FAM187BQ17R55 369 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 NDUFAF6Q330K2 333 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 PLA2G4EQ3MJ16 856 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 NEPROQ6NW34 567 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 SCIMPQ6UWF3 145 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 FAM220AQ7Z4H9 259 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 TMPRSS6Q8IU80 811 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 SETD9Q8NE22 299 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 OR52L1Q8NGH7 329 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 CHST7Q9NS84 486 aa15.57■□□□□ 0.08
PTPRF-206ENST00000429895 TRUB2O95900 331 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 ZNF37AP17032 561 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 NOS2P35228 1153 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 SLC12A3P55017 1021 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 PURAQ00577 322 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 DGCR6Q14129 220 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 TAF5Q15542 800 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 CLVS1Q8IUQ0 354 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 PSTKQ8IV42 348 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 SMYD1Q8NB12 490 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 CEP152O94986 1710 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 GTPBP1O00178 669 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 MMP14P50281 582 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 RTL3Q8N8U3 475 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 TEKT5Q96M29 485 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 TINF2Q9BSI4 451 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 ENOPH1Q9UHY7 261 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 BTRCQ9Y297 605 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 SGTAO43765 313 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 ATP6V1G2O95670 118 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 IDH2P48735 452 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 ALG11Q2TAA5 492 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 NOMO2Q5JPE7 1267 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 HYIQ5T013 277 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 TMC5Q6UXY8 1006 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 BHLHE22Q8NFJ8 381 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 ATP13A3Q9H7F0 1226 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 GPN3Q9UHW5 284 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 PSME2Q9UL46 239 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 SF3B1O75533 1304 aaKnown RBP eCLIP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 FRG1Q14331 258 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 XKR6Q5GH73 641 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 PCID2Q5JVF3 399 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 ZDHHC13Q8IUH4 622 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 PTGR2Q8N8N7 351 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 ZNF75CPQ92670 426 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 MYLK2Q9H1R3 596 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 SH3GLB1Q9Y371 365 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 CLTCQ00610 1675 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 NT5C1B-RDH14C9J2C7 533 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 FGF10O15520 208 aaPredicted RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 MED26O95402 600 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 LTA4HP09960 611 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 FAM153BP0C7A2 387 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 FAM153CQ494X1 144 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 EIF3MQ7L2H7 374 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 CHPFQ8IZ52 775 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 ZCCHC7Q8N3Z6 543 aaKnown RBP15.56■□□□□ 0.08
PTPRF-206ENST00000429895 FANCEQ9HB96 536 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 BTBD7Q9P203 1132 aa15.56■□□□□ 0.08
PTPRF-206ENST00000429895 FRMPD4Q14CM0 1322 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 LOC100506127A0A0U1RQW1 187 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 NPR3P17342 541 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 ME2P23368 584 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 TBX2Q13207 712 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-206ENST00000429895 TMEM119Q4V9L6 283 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 CRTC3Q6UUV7 619 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 SPATA6LQ8N4H0 392 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 MPP4Q96JB8 637 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 CEP44Q9C0F1 390 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 DDX20Q9UHI6 824 aaKnown RBP15.55■□□□□ 0.08
PTPRF-206ENST00000429895 ATXN2Q99700 1313 aaKnown RBP15.55■□□□□ 0.08
PTPRF-206ENST00000429895 PRG2P13727 222 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 MAXP61244 160 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 KIAA0408Q6ZU52 694 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 NOL6Q9H6R4 1146 aaKnown RBP15.55■□□□□ 0.08
PTPRF-206ENST00000429895 DNAJC18Q9H819 358 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 DDX3XO00571 662 aaKnown RBP eCLIP15.55■□□□□ 0.087e-10■■□□□ 12.8
PTPRF-206ENST00000429895 RPL14P50914 215 aaKnown RBP15.55■□□□□ 0.08
PTPRF-206ENST00000429895 MYBPC1Q00872 1141 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 RPTNQ6XPR3 784 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 USP50Q70EL3 339 aaPredicted RBP15.55■□□□□ 0.08
PTPRF-206ENST00000429895 MAP4K3Q8IVH8 894 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 ADGRG2Q8IZP9 1017 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 LRRC39Q96DD0 335 aa15.55■□□□□ 0.08
PTPRF-206ENST00000429895 UROC1Q96N76 676 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms